Results for "Computational RNA Biology"
Bio-Scripts
#!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #transcribe DNA to RNA - T changes to U my $RNA = $...2909 days ago
Perl script introduces control structures, arrays and hashes.
#!/usr/bin/env perl use strict; use warnings; my @first_array = ('DNA', 'ATGCGTGC', 5, 'RNA', 'AUGC'); print $first_arra...for (my $i=0; $i 'ATCGATGCT', 'RNA' =>...2854 days ago
Genetic Algorithms demonstration with word DNA in Perl
#!/usr/bin/perl -w # GA demonstration with word DNA (512 bits)...my $weights = shift @_ or return undef; # internal counting variables my ($co...=> 0 }; } } __DATA__ about algorithm and biology by century come computer...2364 days ago
Biological Sequence handling with Perl !
package Sequence::Generic; # File: Sequence/Generic.pm use strict; use Carp; us...$self->{'type'} = $type || ($sequence=~/u/i ? 'RNA' : 'DNA'); } return $se...$self->{'data'}; return $seq unless $self->is_RNA;...2173 days ago
- ...'/media/urbe/MyPassport/rnaseq_boris/AIG_AAAOSW_8_1_C1CBG...CMD: /home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/util/..//ut...touch /home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/trinity_out...ir -p /home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/trinity_out...ir -p /home/urbe/Tools/trinityrnaseq-...
2119 days ago
- # list sample names & download URLs. sample_links = {"ERR458493": "https://osf.io/5d...ow SAMPLES=sample_links.keys() # download yeast rna-seq data from Schurch et al,...dy rule download_all: input: expand("rnaseq/...
1508 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinsti...ava.io.tmpdir= option to select an alternate temp location. USAGE:...(BETA Tool) Collects reference and alternate allele counts at specified...tigAlignmentsSAMSpark (BETA Tool) (Internal) E...
2067 days ago
