Results for "Conda"
Blogs
List of bioinformatics packages for NGS analysis !
...s the very useful Entrez package for API access to the NCBI databases. [ paper-2009 | web ] Bioconda – A channel for the conda package manager speciali...1156 days ago
Installing Salmon for Trinity !
...nment location: /home/urbe/anaconda3 added / updated specs:...py36_4 331 KB conda-forge jemalloc-5.1.0...1 3.7 MB bioconda conda-4.5.5...nda-forge --> 4.5.5-py36_0 conda-forge Proceed ([y]/n)? y...2147 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...f the assembly. Read Quality Control:Check the qualiy with fastQC.Scripthttps://bioinformaticsonline.com/snippets/view/42540/install-fastqc-using-conda Quality trimming/cleanup of...1218 days ago
Ancient whole genome duplication (WGD) detection tools !
...wgd. Wgd cannot be installed directly with bioconda at present, so it is a little...oftware it depends on can be installed with bioconda conda create -n wgd python...me/Sspon.v20190103.gff3.gzgunzip *.gz First conda activate wgdstart our analysi...1169 days ago
Basic Structure of Snakemake Pipeline Run !
...snakemake -s snakefile.py envs = directory for storing the conda environments that the workflo...vg Run the snakemake (this time not as a dry run) snakemake --use-conda...948 days ago
