Plot custom gene density with R
library(karyoploteR) pp2258 days ago
Bash command to install bwa, samtools, picard !
...aconda_depends-2019.03 | py37_0 5 KB anaconda-custom | py37_1...DED: anaconda 2019.03-py37_0 --> custom-py37_1 Proceed ([y]/n)?...1564 days ago
Pack a perl program with their dependencies on Ubuntu !
...github.com - SvABA is a method for detecting structural variants in sequencing data using genome-wide local assembly. Under the hood, SvABA uses a custom implementation of SGA&nb...1520 days ago
1450 days ago
Install SibeliaZ in your Linux cluster !
...py27_0 6 KB anaconda-custom | py27_1...2019.10-py27_0 --> custom-py27_1 Proceed ([y]/n)?...############################# | 100% anaconda-custom | 3 KB | ##########...1241 days ago
Identify genome-wide synteny with LASTZ alignment
...and chromosomes. RepeatMasker -pa 40 -nolow -norna -gff -xmall -lib custom.TE.lib_for_rice.fa AAChr1.txt RepeatMasker -pa 40 -nolow -norna -gff -xmall -lib custom.TE.lib_for_FF.fa FFChr1.txt...526 days ago