How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependenci...wrappers: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA s...3943 days ago
Five unique traits of effective computational biologist
...lso read about the BioPerl packages, genomics, DNA string, genomic theories, or...re not doing research but merely writing "dry" codes. According to my supervisor...most of the time in from of computers, writing codes. They always think their job...3944 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3943 days ago
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Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the GridION™ system and...e. The platform technology uses nanopores to analyse single molecules including DNA/R...3807 days ago
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Bio++ : C Language libraries for your biological need
...y are designed in order to reduce the C++ long codes in a small and handy for th...d Site objects, with various Alphabet support (DNA, RNA, Proteins, Codons, any 'Wo...tion, translation, replication.Several genetic codes availables: Standard and mito...3941 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides...3941 days ago
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Prime Minister’s 100k Genome Project
Genomics Ebgland is destined to sequence 100,000 patients over the next five year in England. A landmark pr...er in medical science advances to push the boundaries by unlocking the power of DNA d...3916 days ago
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Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathematical Sciences at Chalmers...hods development for and analysis of next generation DNA sequencing, in particular com...large-scale data, in particular from next generation DNA s...3941 days ago
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Bioinformatician special skills !!
Bioinformatician and Computational biologist are the only programmers on Earth who can explain multiplication and division are the same. Pretty codes for them ... /([+-]?\ *(?:...3889 days ago
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Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a research field called bioinformatics....rs to analyze life. One is example is the genome. In all organisms, DNA c...3910 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # h...= x['accession'] print("downloading", nm) dna = Entrez.efetch(db='nucleotid...t').read().split("\n")[1:] allseq[nm] = ''.join(dna)...1130 days ago
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Comment on "Tools for Sequence translation !"
.... It supports several genetic codes and can handle multiple seq.... It supports several genetic codes and can also perform reverse...des functions for translating DNA or RNA sequences into protein s.... It supports several genetic codes and can handle multiple seque...414 days ago