Comment on "Letter of motivation for bioinformatics applicants !"
...lear objective of your future task and the reasons for picking this individual Ph.D. program. Provide...are processes involved without which your chances of getting in may be reduced. There is a demand to rec...1212 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
Check the perl module Test if dependencies are met by running this perl one-liner: perl -e "use JSON::XS;"1227 days ago
Comment on "Sibelia: A comparative genomics tool"
...ine" set is that "loose" usually produces fewer blocks, but longer....15 000 BP), while "fine" option produces more blocks (but shorter)...temporary files in another folder due to some reasons, use this pa...in multiple stages. Every stage produces it's own synteny blocks....1277 days ago
Comment on "Mugsy: multiple whole genome alignment tool"
...This example will align three genomes and output a file /data/output/mygenomes.maf. The --directory setting is also used for storing temporary files during the run.The prefix of eac...1278 days ago
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
Using KAT again (You will need the modules: KAT/2.1.1 and gnuplot/4.6.5) – we can plo...to you computer using scp and look at the png file that was produced. Does the kmer content...1329 days ago
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Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
International Journal of Bioinformatics Research and Applications Indexed in Scopus (Elsevier) Academic OneFile (Gale) ACM Digital Library Current Awareness in Biological Sciences (Elsevier) Chemical Abstracts (CAS)1355 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
#To install perl modules perl -MCPAN -e shell # go to CPAN install modeinstall Bundle::CPAN # update CPANreload cpaninstall Set::Scalar1373 days ago
Comment on "AutoDock Vina: an open-source program for doing molecular docking."
AutoDockFR (or ADFR in short) is a protein-ligand docking program developed in the Sanner laboratory at Scripps Research under the AutoDock umbrella. https://ccsb.scripps.edu/adfr/1414 days ago
Comment on "Setting up autoConTAMPR !"
...necting to the Internet) [yes] yesFetching with LWP:http://espejito.fder.edu.uy/cpan/authors/01mailrc.txt..................................DONEFetching with LWP:http://espejito.fder.edu.uy/cpan/modules/02packages.de...1434 days ago