Results for "Deployment Tool"
Blogs
Ancestral sequence reconstruction (ASR) &nd.../sequence/ reconstruction (ASR) tools: inferCars Reconstru...ral genomes. FastML A user-friendly tool for the reconstruction of anc...lihood for Gene Order Analysis A web tool for the reconstruction of phy...2544 days ago
String graph based genome assembly software and tools !
In graph theory, a string graph is an inte...ng graph’. Following are the genome assembly tools based on string graph: 1.SG...ed to contigs. BASE is a practically efficient tool for constructing contig, with...2342 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for..., and string graph. List of analysis tools developed for Oxford Nanopor...WA Fast nanopore data tuned alignment tool https://github.com/lh3/bwa G...nanopolish nanoporeVariant-detection tool for nanopore sequence datahtt...2334 days ago
Install ImageMagick from Unix Source
ImageMagick builds on a variety of Unix and Unix...ert x86_64-pc-linux-gnu file names to toolchain format... func_convert_f...libraries... pass_allchecking for dlltool... nochecking how to associat...s commandsconfig.status: executing libtool commandsconfig.status: execut...2159 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nuc...ction (ASC) database -- A new tool to assign functions to protei...roteins. EXPASY Proteome Tools Collection Use a collection...d kinases. MeMo -- a web tool for prediction of protein met...ple motifs. SDPpred -- A Tool for Prediction of Amino Acid...2007 days ago
- AWK is a standard tool on every POSIX-compliant UNIX system. It’s like flex/lex, from the co...read files line by line and split on delimiters, AWK is probably the right tool for the job. #!/usr/bin/aw...
1849 days ago
Software for genome assembly !
List of bioinformatics tools/Software Website References for genome assembly...://github.com/lh3/miniasm 4 PBJelly scaffolding tool https://sourceforge.net/projects/pb-jelly/ 5 ARCS scaffolding tool https://github.com/bcgsc/arcs...1357 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant ca...Cheng @Yuanyuan929)● svpack – tools for filtering, comparing, an...CF format (Aaron Wenger)● JumboDB – tool for de Bruijn graph construct...1005 days ago
Protocol for De novo Genome Assembly using Illumina Reads
In this protocol, we address and describe the de novo assembly method for small...mis-assemblies can occur. Mis-assembly checking and assembly metric tools:QUAST - Quality assessment tool for genome assembly http://bi...1218 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, G...roject.org/. RATT: RATT: Rapid Annotation Transfer Tool. Otto, T. D., Dillon, G. P.,...Berriman, M. Nucleic Acids Res. 39, e57 (2011). SAMtools: The Sequence Alignment/Map...1061 days ago
