How to Prepare your Bioinformatics CV ?
...ery brief mention as to your college or schooling. If you are just commencing your working life, having previously been a student, provide more in depth knowledge regarding your acad...3376 days ago
Structural variation: the hidden genomic treasure
...n next generation sequencing data (paired end mapping, split reads, and depth of coverage), array-based app...ocumented. Tools CNVnatora tool for CNV discovery and genotyping from depth of read mapping.2011a,2011b...2706 days ago
3008 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configuration and genom...2169 days ago
Genome Assembly Tools and Software - PART2 !!
...ds from the massively parallel sequencing platforms. IDBA / IDBA-UD 1.1.1 – De Bruijn Graph De Novo Assembler with Highly Uneven Sequencing Depth IDBA is a practical...2689 days ago
Awesome perl frameworks, libraries and software - PART 4
...n. Alpha. SethRobertson/git-what-branch - Discover what branch a commit is on, or how it got to a named branch shabble/irssi-docs - In-depth documentation of the Irssi IR...2497 days ago
List of In-silico Binding Site Prediction Tools
...bio-iitd.res.in/dock/ActiveSite_new.jsp Active Site Prediction of Protein server computes the cavities in a given protein. DEPTH: http://mspc.bii.a-star.edu.sg/tankp/run_depth.html Depth measures the close...3747 days ago
Commercial and public next-gen-seq (NGS) software
...rowsing and analysis of genome sequence data. LookSeq supports multiple sequencing technologies, alignment sources, and viewing modes; low or high-depth read pileups; and easy visual...3522 days ago
Postodoc in Computational/Systems Biology and Machine Learning
...isorders. You have a PhD in Computational Science, Bioinformatics, or equivalent. Especially relevant skills for the profile are: 1. In-depth understanding and implementat...3681 days ago
Opening for RA/extended SRF in Bioinformatics project by DBT at Bose Institute
...(IGCS) for Biomolecular Modeling, Molecular Dynamics & Structures” Desired Profile : Ph.D degree in Biological or Chemical Sciences with in-depth understanding of protein stru...3356 days ago
2996 days ago
How to sequence the human genome - Mark J. Kiel
...sts are now able to know the sequence of letters that makes up an individual genome relatively quickly and inexpensively. Mark J. Kiel takes an in-depth look at the science behind th...3631 days ago
2213 days ago
2078 days ago
Why BreakDancer does not displays the amount of reads supporting SV?
Using breakdancer the output consists of DEL, INV, INS, CTX and ITX. Using following commands: bam2cfg.pl -g -h dis.bam normal.bam > config_file.cfgbreakdancer_max -d test config_file.cfg > dis_normal.ctx the 11th output column should displays the amount of reads supporting the called SV ...Tags: Bioinformatics, SV, BreakDancer, Reads, Depth
2706 days ago
2140 days ago
Comment on "Does anyone have Nanopore latest updates?"
92% genome coverage of E. coli, average depth of 3.8x. But from just _43_ reads https://github.com/nickloman/massive-nanopore-silliness http://lab.loman.net/2017/03/09/ultrareads-for-nanopore/2555 days ago