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Tools to detect synteny blocks regions among multiple genomes
...ements between sequences. This software is useful in studying genome duplication and evolution. It can also ai...brate genomes, and especially the changes following the whole-genome duplication in teleost fish, by tracing t...2618 days ago
Structural variation: the hidden genomic treasure
...hing. CNVs are closely related to segmental duplications (SDs): SDs can stimulate the...riants (SVs) such as deletions, insertions, duplications, inversions and translocatio...translocations, and unbalanced ones such as duplications and deletions (copy number v...2710 days ago
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Useful Publications and Websites for Deep Sequencing Data Analysis
...19315, 2011. Full Text Genome evolution and meiotic maps by massively parallel DNA sequencing: spotted gar, an outgroup for the teleost genome duplication. Amores et al, Genetics 188(4...3787 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...on, selected ENCODE annotation, allele frequency in the 1000 Genomes Project, allele frequency in the Exome Variant Server (ESP6500), segmental duplication annotation, SIFT, PolyPhen2,...2916 days ago
Genome of Rainbow Trout Sequenced
Major finding: “In humans and most vertebrates the duplication events were older so there are fewer duplicated genes still present. Most of the duplicated genes get lost or modif...3671 days ago
NGS Platforms launched by BGI’s MGI Tech
...y DNBseq™, MGISEQ delivers quality data with accuracy for SNP and Indel calling rate of 99.9% and 99%, respectively, along with decreased duplication rate down to less than 2 perc...1950 days ago
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