Results for "Extend"
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...team provides expertise, training and maintains a high-performance computing (HPC) and storage infrastructure, so as to help develop, maintain and extend life science and medical rese...3433 days ago
YASS :: genomic similarity search tool
...for DNA sequences (FASTA, BLAST, PATTERNHUNTER, BLASTZ/LASTZ, LAST ...), YASS uses seeds to detect potential similarity regions, and then tries to extend them to local alignments. Thi...2932 days ago
GeneProf: analysis of high-throughput sequencing experiment
... Tutorial 'Examining Public Next-Gen Data..'). Extensibility:Algorithm developers and computer programmers can develop their own modules and extend GeneProf. Existing software c...2503 days ago
EAGLER: a scaffolding tool for long reads.
...tool for long reads. The scaffolder takes as input a draft genome created by any NGS assembler and a set of long reads. The long reads are used to extend the contigs present in the NG...2169 days ago
- ...ion model using machine learning approach based on branch features, PERGA can determine the correct extension in 99.7% of cases. PERGA will try to extend the contigs by all feasible n...
2168 days ago
BEAP: Blast Extension and Assembly Program
...ively blast nucleotide databases in an attempt to obtain all sequences that overlaps, directly or indirectly, with the "primer" therefore help to "extend" the length of the original s...2162 days ago
Bokeh: An interactive visualization library that targets modern web browsers for presentation
...to provide elegant, concise construction of versatile graphics, and to extend this capability with high-per...sp;Reference Guide. If you are interested in contributing to Bokeh, or extending the library, see the ...2102 days ago
BLAST options, setting and defaults
...ult = 11limited values are supported default = 11limited values are supported default = 5 Gap extension penalty:cost to extend a gap [integer] default = 2...1980 days ago
Tadpole: an assembler, error-corrector, and read-extender
...dditional capabilities of error-correcting and extending reads. It does not do any...sh in=reads.fq out=corrected.fq mode=correctTo extend reads by 50bp in each directi...fq mode=extend el=50 er=50To error-correct and extend at the same time, using a kme...1558 days ago
ContigExtender: a new approach to improving de novo sequence assembly for viral metagenomics data
ContigExtender, was developed to extend contigs, complementing de novo assembly. ContigExtender employs a novel recursive Overlap Layout Candidates (r-OLC) strategy that explores multiple extending paths to achieve longer an...4 days ago
