Results for "FTP"
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Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
(base) [jnarayan@hn1 TOOLS]$ curl -o datasets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LA...32 --:--:-- 425k(base) [jnarayan@hn1 TOOLS]$ curl -o dataformat 'https://ftp.ncbi.nlm.nih.gov/pub/datasets...890 days ago
Comment on "Download desire version of Blast software !"
Latest blast software and old versions https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/952 days ago
Comment on "Download desire version of Blast software !"
Blast v2.12 wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.12.0+-x64-linux.tar.gz952 days ago
Comment on "Download desire version of Blast software !"
Blast database version 4 @ https://ftp.ncbi.nlm.nih.gov/blast/db/v4/952 days ago
Comment on "Command line to create blast uniref database !"
wget ftp://ftp.uniprot.org/pub/databases/uniprot/uniref/uniref90/uniref90.fasta.gz gunzip -v uniref90.fasta.gz makeblastdb -in uniref90.fasta -dbtype prot -input_type fasta -out uniref90.fasta955 days ago
Comment on "REAPR: a universal tool for genome assembly evaluation"
Reapr is a tool trying to find explicit errors in the assembly based on incongruently mapped reads. It is heavily based on too low span coverage, or reads mappin...1347 days ago
Comment on "BLAST nr version 5 database, (nr_v5)"
Blast database version5 tutorial https://ftp.ncbi.nlm.nih.gov/blast/db/v5/blastdbv5.pdf1393 days ago
Comment on "BLAST+ updated !!!"
Latest blast at https://ftp.ncbi.nlm.nih.gov/blast/executables/LATEST/1429 days ago
Comment on "Biological databases !"
all GATK bundle at ftp://ftp.broadinstitute.org/bundle/hg38/1548 days ago
Comment on "Biological databases !"
NCBI released a set of GATK-specific dbSNP VCF's, with the "chr" attached. Those can be accessed at ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606/VCF/GATK/.1553 days ago
