249 days ago
WAAFLE: a Workflow to Annotate Assemblies and Find LGT Events.
...community metagenomes remains an open problem. To address this, we developed WAAFLE: a Workflow to Annotate Assemblies and Find LGT Events.954 days ago
MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
MitoZ, consisting of independent modules of de novo assembly, findMitoScaf (find Mitochondrial Scaffolds), annotation and visualization, that can generate mitogenome assembly together with...885 days ago
571 days ago
doubletrouble: identify duplicated genes from whole-genome protein sequences and classify
...is assigned a unique mode of duplication. Users can also calculate substitution rates per substitution site (i.e., Ka and Ks) from duplicate pairs, find peaks in Ks distributions wit...60 days ago
bacLIFE: an automated genome mining tool for identification of lifestyle associated genes
...nbsp;Results from the previous modules are embedded in a user-friendly interface for comprehensive and interactive comparative genomics. You can find the complete wiki here [https...50 days ago