Results for "Greengenes database"

Blogs

  • Explore taxdump files !

    This is an extract of taxdump-readme.txt to be fo..._id -- node id in GenBank taxonomy database parent tax_id -- parent node id in GenBank taxonomy database rank -- rank of this n...e fields: division id -- taxonomy database division id division cde...

    1562 days ago

  • Useful links to therapy, disease, drug and drug-target network data:

    Useful links to therapy, disease, drug and drug-target netwo....gov/cder/ob/HIDdb: Thomson Investigational drugs database including information on 1070...s/entrez?db=omim PDTD: 3D drug target structure database with a target identification...

    1448 days ago

  • 10 NGS services companies around the globe !

    The global NGS services market is expected to reach USD 13.1 billion by 2025.&...bsp; The company also provides a variety of services such as oligo synthesis, database construction, genome research...

    1273 days ago

  • Bioinformatics tools for telomere to telomere assembly !

    ● Merfin – k-mer-based assembly and variant calling evaluation for impro...ol for splice alignment of long transcriptomic reads to a genome, guided by a database of exon annotations. (Kristof...

    1006 days ago

  • Installing ELGG on Ubuntu !

    Elgg is an open-source and highly customizable framework use...r, is written in PHP, and uses MySQL/MariaDB as a database backend, so you will need to...ystemctl restart apache2 Step 3 – Create a Database for Elgg Next, you will need...

    725 days ago

  • List of comparative genomics resources !

    ...coDing Orthologous Regions A database resource of developmentally a...arative Genometrics (CG) -- a database dedicated to biometric compar...MBGD -- Microbial genome database for comparative analysis Con...hensive suite of programs and databases for comparative analysis of...

    691 days ago

  • Understanding DUMP files from NCBI Taxonomy database !

    *.dmp files are bcp-like dump from GenBank taxonomy database General information. Field...t node id in GenBank taxonomy database   rank -- rank of this...mp): division id -- taxonomy database division id division cde --...med_id -- unique id in PubMed database (0 if not in PubMed) medline...

    674 days ago

  • Common methods to discover tandem repeats

    Tandem repeats are DNA sequences that ar...es. It works by comparing the input sequence to a database of known repeats and then ide...tifies any tandem repeats that match those in the database. PCR-based methods: Poly...

    437 days ago

  • 16sRNA Database Download

    Downloading 16S rRNA databases can be crucial for various bioinformati..., it's important to note that databases can vary based on your specifi...uences from NCBI's Nucleotide database (https://www.ncbi.nlm.nih.gov...ng the provided tools. GreenGenes: GreenGenes is a widely used 16S rRNA g...

    25 days ago