Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Hifiasm is a fast haplotype-resolved de novo assembler for PacBio Hifi reads. It can assemble a human genome in several hours and works with the California redwood genome, one of the most complex genomes sequenced so far. Hifiasm can produce primary/alternate assemblies of quality competitive wit...Tags: Hifiasm, haplotype-resolved, assembler, accurate, Hifi, reads
1227 days ago
How HiFi Reads Different from Traditional PacBio Long Reads ?
Trying to understand HiFi reads, any link could help ...Tags: HiFi, PacBio, Reads, Third, Generation, Sequencing
1226 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling evaluation for improved consensus accuracy (Arang Rhie)● PanGenie – algorithm that leverages a pangenome reference built from haplotype-resolved genome assemblies in conjunction with k-mer count information from r...Tags: optimize, HiFi, reads, correct, tools
991 days ago
Tags: Understanding, HiFi, Reads, NGS
772 days ago