Results for "Identification"
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flexidot: Highly customizable, ambiguity-aware dotplots for visual sequence analyses
...s for strict and relaxed handling of mismatches and ambiguous residues. The custom shading modules facilitate dotplot interpretation and motif identification by adding information on sequ...1465 days ago
HS3D: Homo Sapiens Splice Sites Dataset
...The aim of this data set is to give standardized material to train and to assess the prediction accuracy of computational approaches for gene identification and characterization. From th...1416 days ago
GRIDSS: the Genomic Rearrangement IDentification Software Suite
GRIDSS is a module software suite containing tools useful for the detection of genomic rearrangements. GRIDSS includes a genome-wide break-end assembler, as well as a struc...1442 days ago
SEASTAR: Systematic Evaluation of Alternative STArt site in RNA
...te in RNA) is a software package for Transcription Start Site (TSS) identification and quantification using only...TSSs from a public database. This package enables high-quality TSS identification that is comparable to the hig...1354 days ago
PyParanoid: a pipeline for rapid identification of homologous gene families in a set of genomes
PyParanoid is a pipeline for rapid identification of homologous gene families in a set of genomes - a central task of any comparative genomics analysis. The "gold standard" for identifyin...1354 days ago
Applied Computational Genomics Course at UU: Spring 2020
...gies. A diverse range of biological questions enabled by modern DNA sequencing technologies will be explored including sequence alignment, the identification of genetic variation, structu...1223 days ago
- ...mposed of four core procedures including reads alignment, assembly, identification and quantification. It contai...sp;https://www.lncrnablog.com/lncpipe-a-nextflow-based-pipeline-for-identification-and-analysis-of-long-non-codi...
955 days ago
PaReBrick: PArallel REarrangements and BReaks identification toolkit
PaReBrick. The tool takes a collection of strains represented as a sequence of oriented synteny blocks and a phylogenetic tree as input data. It identifies rearrangements,...933 days ago
- fastv is an ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. It detects microbial sequences from FASTQ data, generates JSON reports and visualizes...
869 days ago
- ...them together, AnchorWave generates a whole-genome alignment for each collinear block. AnchorWave implements commands to guide collinear block identification with or without chromosomal r...
795 days ago
