Results for "Identity"
Bio-Scripts
Blast result parser with Perl and Bioperl
...get the similarity value printf OUT "%.1f" , ($hsp->frac_conserved * 100); print OUT "%\t"; # get the identity value printf OUT "%.1f"...2929 days ago
Create genome scaffolding with Perl
...ields)), -verbose => 0}); } ## calculate percent identity my $qAliSize = $qEnd - $qS...rojOpts->{"pid"}){ # printf(STDERR "Rejecting match '%s' vs '%s': identity (%f) too low\n", #...2323 days ago
Plot the clock using Lastz -gerenal outfile
use strict; use warnings; use Statistics::R ; use List::Util qw(sum); #Usage perl clockPlot.pl Palindrome.palfc 1500 my $R = Statistics::R->new() ; $R->startR ;...2314 days ago
Installing Porechop on Ubuntu !
...HOLD A read must have at least this percent identity to a...he difference between a read's best barcode identity and its second-best barcode i...2121 days ago
Perl script to parse blast results and plot basic stats !
...", $entry->{SUBJECT}, "\n"; print "Percent Identity: ", $entry->{PERCENT_IDENTITY}, "\n"; print "Alignment...SCORE'); # Print summary statistics print "Average Percent Identity: $avg_percent_identity\n";...109 days ago
