Computer simulation of genetic mechanism !!
...biological evolution http://abacus.gene.ucl.ac.uk/software/indelible/ invertFREGENE InvertFREGENE is a forward-in-time simulator of inversions in population genetic data ht...2975 days ago
Structural variation: the hidden genomic treasure
...such as deletions, insertions, duplications, inversions and translocations litter gen...al cases of adaptive evolution. For example, inversions have been associated with eco...(Large insertions, translocation, deletion, inversions....) Tools table: http...2703 days ago
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List of generic simulation software/tools/resource with brief description and homepage !!!
...simulator of biological evolution http://abacus.gene.ucl.ac.uk/software/indelible/invertFREGENE InvertFREGENE is a forward-in-time simulator of inversions in population genetic data ht...3737 days ago
Tools for Searching Repeats And Palindromic Sequences
...ndobucleases) designed to cut the DNA strands at specific locations (i.e., at palindromes). Palindromes may arise from brakeage and chromosomal inversions that form inverted repeats th...2211 days ago
Bioinformatics -- Understanding of living systems through information science
...anism evolves, its genome sequence changes through sudden mutations. Additionally, at the genome level, mutations called rearrangements, such as inversions, transpositions, and duplicat...3917 days ago
Create random 5 inversions in genome !
...min_size = 1000 The option inversion_max_size has been specified: inversion_max_size = 100000 [Sun Jan 10 16:30:40 2021] Introducing random Inversions based on the following parame...1211 days ago
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and short indels. Structural Variations (SVs) and Copy Number Variations (CNVs) are a major source of genomic variation. However, compar...Tags: Bioinformatics, Chromosome, Genome, NGS, Structure Variation, Deletions, Insertions, Duplications, Inversions, Translocations
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Comment on "Sibelia: A comparative genomics tool"
...tion and [1]. The "loose" option produces longer blocks and better coverage, while "fine" can capture small-scale rearrangements, for example, inversions of size < 15 000 BP. The "...1285 days ago