Results for "KEGG"
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List of gene ontology software and tools
...matics.cau.edu.cn/easygo/ g:GOSt (Institute of Computer Science, University of Tartu) g:GOSt retrieves most significant Gene Ontology (GO) terms, KEGG and REACTOME pathways, and TR...3702 days ago
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- ...he latter is also suitable for non-programmers. Orange Bioinformatics provides access to publicly available data, like GEO data sets, Biomart, GO, KEGG, Atlas, ArrayExpress, and PIP...
3491 days ago
- ...for genes and gene clustersBioconductor version: Release (3.3)This package implements methods to analyze and visualize functional profiles (GO and KEGG) of gene and gene clusters.Au...
2872 days ago
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BioRuby :Ruby packages for biologist
...Classes for Multiple alignment (Bio::Alignment), Gene Ontology(Bio::GO), PDB (Bio::PDB), FANTOM database(Bio::FANTOM), GFF (Bio::GFF) and KEGGOrthology (Bio::KEGG::KO). They also added suppor...3939 days ago
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Apps for Busy Bioinformatics Researchers !!!
.... Genes are linked to common life science websites such as NCBI, COSMIC, KEGG, PubMed, SymAtlas, UCSC genom.... The application interfaces with Simbiot, Ensembl, NCBI, Gene Ontology, KEGG Pathways, PubMed, Genomic Var...3533 days ago
- ...between the information in one of the pathway knowledge databases (KEGG,Reactome,Panther,BioCarta, Pa...bsp;Pathway Commons, Reactome ,Panther, BioCyc, WikiPathways, Pathvisio, KEGG, NCI, Stringdb, Amigo, W...
3488 days ago
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BEReX : Biomedical Entity-Relation eXplorer
BEReX is a new biomedical knowledge integration, search, and exploration tool. BEReX integrates eight popular databases (STRING, DrugBank, KEGG, PharmGKB, BioGRID, GO, HPRD, and MSig...3832 days ago
- Researchers in Andhra Pradesh have developed a database to identify genes that are common in tumours to provide their colleagues with easy access to insights into the...
3161 days ago
Fun
Bioinformatician become producer/director !!!
...Paar Proteomics Koi Khel Nahi Jish Desh Mein Day Hoff Rehta Hai PDB Ek Numbari Structure Dus Numbari GCG Karo Sajana Naukar NCBI Ka 1942 -- A KEGG Story Algorithm Se Program T...3911 days ago
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KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment
KOBAS 3.0 is a web server for gene/protein functional annotation (Annotate module) and functional gene set enrichment(Enrichment module). For Annotate module, it accepts gene list as input, including IDs or sequences, and generates annotations for each gene based on multiple databases about ...Tags: KOBAS, web, server, gene, protein, functional, annotation, functional, gene, set, enrichment, KEGG
2017 days ago
KEGG Mapper – Reconstruct Pathway
Reconstruct Pathway is a KEGG PATHWAY mapping tool that assists genome and metagenome annotations. The input data is a single gene list (for a single organism) or multiple gene lists (for multiple organisms) annotated with KEGG Orthology (KO) identifiers or K numbers. Each line of the gene l...Tags: KEGG, Mapper, Reconstruct, Pathway, Bacteria
1963 days ago
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Comment on "List of gene ontology software and tools"
GeneSCF serves as command line tool for clustering list of genes based on functional annotation (Geneontology, KEGG, REACTOME and NCG). This tool requires gene list in the form of Entrez Gene IDs or Official gene symbols as a input. http://genescf.kandurilab.org/1484 days ago
- ...repare_database USAGE: ./prepare_database -db=[GO_all|GO_BP|GO_MF|GO_CC|KEGG|REACTOME|NCG] -org=[see,org_c...CIFIED========== [-db= | --database=] Options:[GO_all|GO_BP|GO_MF|GO_CC|KEGG|REACTOME] [-org= | --organis...
2550 days ago
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