Results for "Linux Filesystem"
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Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation &nb...nbsp; Requirement: GeneSCF only works on Linux system, it has been successfu...n Ubuntu, Mint and Cent OS. Other distributions of Linux migh...2871 days ago
Awesome perl frameworks, libraries and software - PART 1
...d Multipart sync to Amazon Glacier skx/sysadmin-util - Tools for Linux/Unix sysadmins. perl-carton/...erl based tool to parse DMARC reports from an IMAP mailbox or from the filesystem, and insert the information i...2488 days ago
- When you have both Illumina and Nanopore data, then SPAdes remains a good option for hybrid assembly - SPAdes was...oduces: SPAdes genome assembler v3.10.1 Usage: /usr/local/SPAdes-3.10.1-Linux/bin/...
2350 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformatician to the frequently used tools for NGS analysis as well as giving experience in writing one-l...2280 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-cell...849 days ago
Installing Bio::SCF perl module
Most Perl modules are written in Perl, some use XS (they are writte...cking build system type... x86_64-unknown-linux-gnuchecking host system type... x86_64-unknown-linux-gnuchecking for cos in -lm......vior for SCF.xs (see perlxs manual)x86_64-linux-gnu-...2217 days ago
- $ sudo apt-get install python-numpy python-scipy python-matplotlib ipython ipython-notebook python-pandas p...matically installed and are no longer required: bridge-utils containerd linux-headers-4.4.0-116 linux-head...
2189 days ago
Ancestral sequence reconstruction steps !
Ancestral sequence reconstruction (ASR) – also known as ancestral gene/sequence reconstruction/re...ttp://web.cbio.uct.ac.za/~darren/rdp.html" 4.4- Hyphy (Mac, Windows, Linux) in...2178 days ago
LINKS scaffolder bloomfilter setting !
➜ bin git:(master) ✗ ls -l total 68 drwxrwxr-x 3 urbe urbe 4096 Jun 15 12:15 lib...cxx -I/home/urbe/anaconda3/lib/perl5/5.22.0/x86_64-linux-thread-multi/CORE/ -fPIC -Dbo...cxx -I/home/urbe/anaconda3/lib/perl5/5.22.0/x86_64-linux-thre...2150 days ago
- It's been a while since I last installed BLAT and when I went to the down.../admin/exe/ and that there was a linux x86_64 executable for my arch...p://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blat/. Though YYMV, BL...ased system this gave: x86_64-redhat-linux-gnu...
2062 days ago
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