Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
...ets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATEST/linux-amd64/datasets' % Total % Receive...mat 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATEST/linux-amd64/dataformat' % Total % Recei...896 days ago
Comment on "Estimate Genome Size with Jellyfish and R"
Jellyfish manual at http://www.genome.umd.edu/docs/JellyfishUserGuide.pdf997 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformatics Journals Ranks from Google Scholar 1: Bioinformatics Journals (the most recent Impact Factor :: 5-year Impact Factor) WIREs Computational Molecular...1120 days ago
Comment on "URMAP, an ultra-fast read mapper"
map command Maps unpaired reads to a reference genome. The reference genome is stored as a UFI file created by the make_ufi command. The original FASTA file for...1299 days ago
Comment on "Sibelia: A comparative genomics tool"
..."." You can change this by setting cmd parameter: -o <dir nam...ry. You can change this by setting cmd parameter: -t <dir nam...written. To output this file, set cmd parameter: -q or --sequen...ent to running with the -s "loose" cmd option. As you may notice, th...1301 days ago
Comment on "Setting up autoConTAMPR !"
...untu/ trusty/universe libclass-methodmaker-perl amd64 2.19-1 [201 kB]Get:2 http:/...tu.com/ubuntu/ trusty/main libterm-readkey-perl amd64 2.31-1 [27.4 kB]Get:5 http:...ntu.com/ubuntu/ trusty/universe libstaden-read1 amd64 1.13.5-1.1 [182 kB]Get:2 ht...1458 days ago
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Comment on "Genome in a Bottle (GIAB) Consortium"
...d 2012, and the consortium holds open, public workshops typically annually at Stanford University in Palo Alto, CA or at NIST in Gaithersburg, MD. Slides from workshops and co...1576 days ago
Comment on "RGFA: powerful and convenient handling of assembly graphs"
The Graphical Fragment Assembly (GFA) is a proposed format which allow to describe the product of sequence assembly. This gem implements the proposed specifications for the GFA format described under https://github.com/GFA-spec/GFA-spec/blob/master/GFA-spec.md as close as possible.1583 days ago