CANU genome assembly parameters !
...reports generated by the assembler, or calculated using standard UNIX command line tools. More at https://canu.readthedocs.io/en/latest/faq.html...1960 days ago
List of tools frequently used while genome assembly
List of tools frequently used while genome assembly: I have used the following assemblers Spades (v. 3.10.1) CANU (v. 1.6) Unicycler (v. v0.4.1)...1945 days ago
Understanding reads mapping and flags !
Linear Alignment: An alignment of a read to a single reference sequence that may include insertions, deletions, skips and clipping, but may not include...1852 days ago
Coronavirus COVID ‐19 Testing Sites In India
...Graduate Inst. of Med. Sciences, Rohtak, Haryana BPS Govt Medical College, Sonipat State: Himachal Pradesh Indira Gandhi Medical College, Shimla, Himachal Pradesh Dr.Rajend...1525 days ago
New Machine Learning Packages in R
Machine Learning autokeras v1.0.1: Implements an interface to AutoKeras, an open source software library for automated machine learning. See README&nb...1515 days ago
Useful links to therapy, disease, drug and drug-target network data:
....ca/ Drug-Target Network: network data of 890 drugs and 394 target human proteins http://www.nature.com/nbt/journal/v25/ n10/suppinfo/nbt1338_S1.html Drug-Therapy Network: three...1449 days ago
Software for genome assembly !
...for genome assembly: 1 Falcon https://github.com/PacificBiosciences/pb-assembly 2 Canu assembler http://canu.readthedocs.io/en/latest/index.html 3 Miniasm assembler https://...1359 days ago
10 NGS services companies around the globe !
The global NGS services market is expected to reach USD 13.1 billion by 2025. Here are the top 10 NGS services companies to look for – 1.&n...1274 days ago
Run bash script in Perl program !
BioPerl is a compilation of Perl modules that can be used to build bioinformatics-related Perl scripts. It is used, for example, in the development of source codes, s...652 days ago
Ancient whole genome duplication (WGD) detection tools !
...t is a little troublesome to install, because it depends on a lot of software. wgd depends on the following software BLASTMCLMUSCLE/MAFFT/PRANKPAMLPhyML/FastTreei-ADHoRe But the goo...1170 days ago