Results for "Making good friends etc."
Bio-Scripts
# To follow these instructions, we'll assume your system admins have already installed these e.../5.0/perl-5.24.1.tar.gz cd src tar -zxf perl-5.24.1.tar.gz # Configure and build, maki...2143 days ago
Genetic Algorithms demonstration with word DNA in Perl
#!/usr/bin/perl -w # GA demonstration with word DNA (512 bits) use strict; use Data::Dumper; # individuals in the population my $popsize = 1024; # a good...2370 days ago
Create genome scaffolding with Perl
#!/usr/bin/perl use warnings; use strict; use English; use Pod::Usage; ## uses pod doc...y $postTrim = min($sLen - $sEnd, $lLen - $lEnd); ## Only continue on if there's a good...2307 days ago
- ➜ Tools git:(master) ✗ git clone git://github.com/bcgsc/bloomfilter.git Cloning...ing directory '/home/urbe/Tools/bloomfilter' Maki...y '/home/urbe/Tools/bloomfilter/Tests/AdHoc' Making...WARNING: unrecognized options: --with-boost Maki...
2150 days ago
Installing Porechop on Ubuntu !
➜ Tools git:(master) ✗ git clone https://github.com/rrwick/Porechop.git Cloning into...LE_THRESHOLD] [--extra_middle_trim_good_side EXTRA_MIDDLE_TRIM_GOOD_SI...(default: 85.0) --extra_middle_trim_good...2104 days ago
- #GffRead: GFF/GTF utility providing format conversions, filtering, FASTA sequence extraction a...ed.clean.fasta gene_structures_post_PASA_updates.19157.gff3 #There are also another good...
1202 days ago
Tadpole is 250x faster than SPADes assembler !
lege@jit-Lenovo-ideapad-320-15ISK:~/Downloads/MyTools/Vir$ tadpole.sh Written by B...ltiples of 2 from 32-62, multiples of 3 from 63-93, etc. P...ltaonly=t (mdo) Only mark bad bases adjacent to good bases. meo=t (...974 days ago
