1419 days ago
truvari: Structural variant comparison tool for VCFs
Structural variant comparison tool for VCFs Given benchmark and comparsion sets of SVs, calculate the recall, precision, and f-measure. Spiral Genetics Motivation1406 days ago
GROMACS: a versatile package to perform molecular dynamics
GROMACS is a versatile package to perform molecular dynamics, i.e simulate the Newtonian equations of motion for systems with...cleic acids. The WeNMR GROMACS web portal combines the versatility of this molecula...1369 days ago
vsFilt: A tool to improve virtual screening by structural filtration of docking poses
The vsFilt is the first open application for post-docking structural filtration, available as a web-server. The new t...to detect a wide range of interaction types that are known to be involved in molecula...1258 days ago
453 days ago
homologizer: Phylogenetic phasing of gene copies into polyploid subgenomes
This tutorial describes the usage of homologizer to phase gene copies into polyploid subgenomes. The tutorial is an abbreviated version of a soon-to-be published paper in Methods in Molecula...338 days ago
40 days ago
A web-based tool for sequence alignment statistics and innovative visualization
AlignStatPlot, a new R package and online tool that is well-documented and easy-to usef...findings. It is a simple tool that can be used in conjunction withpopulation genetics software (PDF) AlignStatPlot:...32 days ago