How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several per...wrappers: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA sequencinglibbiojava-java - J...3952 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse...he great biological programmer also read about the BioPerl packages, genomics, DNA string, genomic theories, or...3953 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3952 days ago
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Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the Gr.... The platform technology uses nanopores to analyse single molecules including DNA/RNA and proteins. With a broa...3815 days ago
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Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for...s:Sequence analysis Sequence and Site objects, with various Alphabet support (DNA, RNA, Proteins, Codons, any '...3950 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides an integrated...3950 days ago
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Bioinformatics PhD studentship available in New Zealand
Bioinformatics PhD studentship available in New Zealand The importance of transcriptional control has been explored...l far from having a complete picture of the regulatory mechanisms of genes and non...3950 days ago
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Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a...fe. One is example is the genome. In all organisms, DNA contains genetic information,...3919 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "...= x['accession'] print("downloading", nm) dna = Entrez.efetch(db='nucleotid...').read().split("\n")[1:] allseq[nm] = ''.join(dna) import json with open("d...1138 days ago
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The Story of You: ENCODE and the human genome
Ever since a monk called Mendel started breeding pea plants we've been learning about our genomes. In 1953, Watson, Crick and Franklin described the structure of the molecule that makes up our genomes: the DNA double helix. Then, in 2001, scientists wrote down the entire 3-billion letter code con...Tags: ENCODE, Genome, Non-coding DNA, DNA, Animation
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Comment on "Tools for Sequence translation !"
Sequence translation is the process of converting a DNA or RNA sequence into its corr...tool that allows users to translate a DNA sequence into its correspondi...nd provides functions for translating DNA or RNA sequences into protein...423 days ago
Comment on "China’s BGI says it can sequence a genome for just $100"
https://www.bloomberg.com/news/features/2019-11-13/chinese-genetics-giant-bgi-wants-to-tailor-medicine-to-your-dna1529 days ago