Results for "Ontology"
Blogs
List of gene ontology software and tools
...tools for navigating the gene ontology have been developed. The G...quick tips for using the Gene Ontology. Read "Ten Quick Tips for Us...tatistically significant gene ontology co-clustering has occurred....illa.cs.technion.ac.il/ Gene Ontology for Functional Analysis (GOFF...3710 days ago
List of motif discovery tools !
...n for enzymes in the Protein Data Bank. ConFunc -- Conserved residue Protein Function Prediction Server Predict protein function using Gene Ontology. ConSurf-DB -- evolution...1993 days ago
Bookmarks
- We have developed the Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simp...ons, and guides users to add new terms to the Sequence Ontology when required. SOBA is available at http://www.sequenceontology.org/cgi-bin/soba.cgi. More a...
1383 days ago
REVIGO: Reduced Visualize gene ontology
REViGO can take long lists of Gene Ontology terms and summarize them by removing redundant GO terms. The rema...s. More about REViGO... | Please enter a list of Gene Ontology IDs below, each on its own li...2105 days ago
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Pages
BioRuby :Ruby packages for biologist
...twice or more lines of other languages because of Ruby's extremely high descriptive power. Classes for Multiple alignment (Bio::Alignment), Gene Ontology(Bio::GO), PDB (Bio::PDB), FAN...3947 days ago
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...onductor, held in Seattle in Dec 2010 Genomic Regions Enrichment of Annotations Tool - A web service to test for over-representation of specific ontology categories among genes near C...3779 days ago
List of bioinformatics open source projects/software.
...bio4j.com/ Bio4j is a bioinformatics platform and graph based database built around most data available in UniProt KB(Swiss-Prot + TrEMBL), Gene Ontology (GO), UniRef (50,90,100), Ref...3757 days ago
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Wire posts
Opportunity posts
Visiting Scientist - Computational Genomics (two positions)
...association study (GWAS) related analysis- LD analysis, hapmap and trait mapping Expression analysis based on RNA-Seq data, annotation, gene ontology and metabolic pathway analysi...3589 days ago
Visiting Scientist - Computational Genomics
...tion with others Genome wide analysis- LD analysis, hapmap, genetic map construction and qtl mapping Expression analysis based on RNA-seq, gene ontology and metabolic pathway data S...2484 days ago
Video
- ...ner and Gerald Rubin, a bioinformatics initiative to unify the representation of gene and gene product attributes across all species, called Gene Ontology. He graduated from Harvard Co...
3873 days ago
Tags
REVIGO: Reduced Visualize gene ontology
REViGO can take long lists of Gene Ontology terms and summarize them by removing redundant GO terms. The remaining terms can be visualized in semantic similarity-based scatterplots, interactive graphs, or tag clouds. More about REViGO... | Please enter a list of Gene Ontology IDs...Tags: REVIGO, Reduced, Visualize, Gene, Ontology
2105 days ago
- The GO knowledgebase is composed of two primary components: the Gene Ontology (GO), which provides the logical structure of the biological functions (‘terms’) and their relationships to one another, manifested as a directed acyclic graph the corpus of GO annotations, evi...
Tags: Gene, Ontology, Consortium
1941 days ago
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Comments
- ...ention in FTP files) from the database KEGG (01/January/2017) and Gene Ontology (January 2017), the GeneSCF (...ng to KEGG when using GeneSymbol as input Some organism from Gene Ontology was not supported The ab...
2661 days ago
Comment on "List of gene ontology software and tools"
Recently published TopoICSim: a new semantic similarity measure based on gene ontology provide a new view on similarity measure provides a competitive method with robust perf...2832 days ago
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