Results for "Open"
Users
About me: ...structure. Raghava woked as visiting professor at POSTECH, South Korea (2004) Scientific Contribution: Raghava is a strong suporter of open source software and open access, all resouces develoed...3488 days ago
- About me: Biomedical researcher, entrepreneur. Envision openscience and cross border collaboration that push scientific progressInterests: open science
3050 days ago
Blogs
Five unique traits of effective computational biologist
...lls proactively. But great biological programmers not only learn new technical skills on their own but also learn non-technical skills, and have an open mind to sources of knowledge...3943 days ago
Five points for bioinformatics software/tools
...hould I try to use these free open source programs? Why ar...al programmers who believe in open sharing of knowledge. They co...rings the biggest downside of open-source programs; where you ne...e to tell only one think that open source solutions allows you t...3701 days ago
- +22 more Blogs
Bookmarks
- I bet, this website will be your best friend in near future. This helps us to explore the existing open source codes and learn from it. You can find some useful open source bioinformatics codes for your analysis...
3909 days ago
Taverna Workflow Management System
Taverna is an open source domain independent Workflow Management System – a suite of tools used to design and execute scientific workflows. Taverna has been created by...3909 days ago
- +81 more Bookmarks
Files
- ...with interactive button. This will be helpful for the entire biology and bioinformatics student. How to run? You need to install flash player or open it with web browser ( I guess...
3547 days ago
- ...G_v2.0.5/bin/preprocess_reads.pl" and have the following error: fail to open file './temporarySam' [bwa_a...all_p_ctg.fa -[main] Real time: 2402.523 sec; CPU: 53429.488 sec[E::hts_open_format] Failed to open file t...
2144 days ago
Pages
Bio++ : C Language libraries for your biological need
...with I/O from CSV files, probability distributions.etc. Utils Files: working on file paths, getting file extensions and names, testing existence, open and store in string arrays, e...3941 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for...sity(Bioinformatics Center) and the Open Bio Foundation. The project w...ject in 2005RubyForge is a home for open source Ruby projects: RubyFor...KEGG API. Wiki Linkshttp://bioruby.open-bio.org/wiki/BioRubyOnRailsht...3940 days ago
- +6 more Pages
Top-level pages
- ...t order of sequence contigs to obtain one continuous sequence; find the tranlation and transcription initiation sites, find promoter sites, define open reading frames (ORF); find s...
3940 days ago
Bioinformatics Courses Around the World
...ogical Sequence Analysis (Master's and Phd courses) University of Copenhagen, Bioinformatics Centre o...nbsp;, Pakistan bachelor of science in bioinformatics (The) Global Open University at Nagaland, India...3936 days ago
- +21 more Top-level pages
Wire posts
News
NGS course Medical Genomics, scheduled for 17-20 September 2013 in UZ Leuven (Belgium).
This course is open to all students and postdocs and registration for all academic participants is free of charge. To help us in organizing the course, please register online...3912 days ago
Vaccination can be dangerous sometimes !!!
...roup of scientist led by Surender Khurana discover that Pigs vaccinated against H1N2 influenza were more vulnerable to the rarer H1N1 strain. Which open a new area of discussion, and...3888 days ago
- +16 more News
Opportunity posts
CSIR-INSTITUTE OF GENOMICS & INTEGRATIVE BIOLOGY
CSIR-INSTITUTE OF GENOMICS & INTEGRATIVE BIOLOGY, Mall Road, Delhi 110007 POSITIONS OPEN FOR TEMPORARY RESEARCH PROJECT POSTS (Date of interview 23rd September 2013 at 10:3...3895 days ago
Research Project Posts for CSIR Project, Delhi
Positions Open For Temporary Research Project Posts for CSIR Project, Delhi CSIR is looking for bright young candidates to get involved in building algorithms and platform...3897 days ago
- +44 more Opportunity posts
ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...pt profiles. We are interested to find how these links are rewired by mutations to cause disease. This work is supported through the development of open-source biological pathway and...3941 days ago
- Raghava's group is known for developing open source software or web servers. Group have developed large number of web-based services. Find more at http://www.imtech.res.in/raghava/
3665 days ago
Fun
Perl Poem: Parse it in both Perl and English!
...t and the Guardian: #!/usr/bin/perl APPEAL: listen (please, please); open yourself, wide;join (you, me)...family, anyone); do*not*die (like this)if sin abounds; keys (hidden), open (locks, doors), tell secrets;...3912 days ago
Bioinformatician special skills !!
...)/; $line =~ /^(.+)(e|r)(.*)$/; /"(?:[^"\\]++|\\.)*+"/; /^[+-]?\ *(\d+(\.\d*)?|\.\d+)([eE][+-]?\d+)?$/; perl -ne 'BEGIN{$/=">"}if(/^s*(S+)/){open(F,">$1")||warn"$1 write fa...3889 days ago
- +1 more Fun
Video
Genetics for Fun and Profit: Andrew Hessel at TEDxVilnius
...world-leading organizations that include Google, Autodesk, and NASA. He is also the founder of the Pink Army Cooperative, a venture aiming to make open source personalized cancer th...3892 days ago
A History of Bioinformatics (in the Year 2039)
C. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-20393567 days ago
- +1 more Video
Bio-Scripts
Python script to download covid genome !
...Entrez.efetch(db='nucleotide',id=nm, rettype = 'fasta', retmode= 'text').read().split("\n")[1:] allseq[nm] = ''.join(dna) import json with open("data/allseq.json", "w") as f...1129 days ago
- ...e = "/home/anjana/patterns/polyA.pat"; # Go to sequence directory and open it (i.e, read contents) chdir($myDir) || die "Cannot change to $myDir: $!"; # Go to $myDir opendir(DIR, ".") || die "Cannot o...
2909 days ago
- +76 more Bio-Scripts
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...analysis and comparison of high-throughput experimental data in an integrated manner and besides lots of the packages it provides, it is open source and also open for development. As a result,...2355 days ago
Groups
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides analytical and statistical routines, parsers for common...3896 days ago
...tools for the analysis and comprehension of high-throughput genomic data. Bioconductor uses the R statistical programming language, and is open source and open development. This group have...3944 days ago
- +1 more Groups
Tags
INRAE organises open competitions to recruit research scientists on permanent positions.
Each year, INRAE organises open competitions to recruit research scientists on permanent positions. The recruitment campaign is generally aimed at researchers who have recently obtained their PhD. Candidates are recruited on the basis of their scientific competence which they will put to the serv...Tags: INRAE, organises, open, competitions, recruit, research, scientists, permanent, positions
1547 days ago
Summer school open to PhD students
Some PhD students are organizing a summer school open to PhD students with different backgrounds and interests. Several sessions and workshops will be held within five focus groups, and one common theme: mountain research. The summer school will take place in Obergurgl, in the middle of the...Tags: summer, school, open, PhD, students, austria
816 days ago
- +1 more Tags
Comments
- ...s with different error rates, read lengths, and insert sizes. The ART is open-source and available for free...t read lengths, error rates, and coverage levels. The wgsim tool is also open-source and available for free...
409 days ago
Comment on "Short-read assembly using Spades !"
...ontains the sequencing reads. If the reads are paired-end, they should be provided in separate files for each read. Run SPAdes: To run SPAdes, open the terminal and navigate to...414 days ago
- +30 more Comments
