Tools to detect synteny blocks regions among multiple genomes
...(with BAC-end or marker sequence). http://genomevolution.org/CoGe/SynMap.pl RegionMiner (http://www.genomatix.de/online_help/help_regionminer/orthologous.html) SyntenyMiner is being...2630 days ago
List of comparative genomics resources !
...atabase Find information about orthologous genes in prokaryotes. An...CONDOR -- COnserved Non-coDing Orthologous Regions A database resource...e conservation. OMA -- the Orthologous MAtrix project Explore ortho...ealogy of genes: Non-supervised Orthologous Groups Discover orthologous...698 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignments, and then keeps only the parts that are orthologous, i.e. following the conserved order an...2934 days ago
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Tags: MimiLook, Phylogenetic, Workflow, Detection, Gene, Acquisition, Major, Orthologous, Groups, Megavirales
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Comment on "Tools to detect synteny blocks regions among multiple genomes"
...r Ensembl. Gene annotation: Annotate the genes in each genome using gene prediction software or tools such as MAKER. Identify orthologous genes: Identify the orthologous genes between the genomes usi...444 days ago