Platypus – R package for object detection and image segmentation.
platypus is an R package for object detection and semantic segmentation. Currently using platypus you can perform: multi-class semantic segmentation using U-Net architecture multi-class object detection using YOLOv3 architecture You can install the late...Tags: Platypus, R, package, object, detection, image, segmentation
1266 days ago
DnaSP: DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms
DnaSP, DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms using data from a single locus (a multiple sequence aligned -MSA data), or from several loci (a Multiple-MSA data, such as formats generated by some assembler RAD-seq software). DnaSP can estimate severa...Tags: DnaSP, DNA, Sequence, Polymorphism, software, package, analysis, DNA, polymorphisms
1249 days ago
Alienomics "environment is inconsistent" error ?
$ conda install -c jnarayan81 alienomics The environment is inconsistent, please check the package plan carefullyThe following packages are causing the inconsistency: - defaults/linux-64::jupyter==1.0.0=py37_7 - defaults/noarch::pygments==2.5.2=py_0 - defaults/noarch::jupyter_c...Tags: Alienomics, error, inconsistent, conda, package, install
1167 days ago
How to fiv "Error in library(reshape) : there is no package called ‘reshape’"
[main] Real time: 2.026 sec; CPU: 1.798 secPlotting the coverageError in library(reshape) : there is no package called ‘reshape’Execution halted./setu.sh -k yes -m pe -t 1 -r SRR11140750_1.fastq.gz,SRR11140750_2.fastq.gz 11,91s user 1,30s system 125% cpu 10,533 totalTags: Error, library, reshape, package, R, ‘reshape’
1141 days ago
Luigi: a Python package that helps you build complex pipelines of batch jobs.
Luigi is a Python (3.6, 3.7, 3.8, 3.9 tested) package that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization, handling failures, command line integration, and much more. Run pip install luigi to install the latest stable version...Tags: Luigi, Python, package, build, complex, pipelines, batch, jobs
1039 days ago
The Snakemake Wrappers repository
The Snakemake Wrapper Repository is a collection of reusable wrappers that allow to quickly use popular tools from Snakemake rules and workflows. More at https://github.com/snakemake/snakemake-wrappersTags: Snakemake, Wrapper, Repository, collection, reusable, wrappers, package
983 days ago
Tags: kebabs, package, kernel, analysis, biological, sequences, Support, Vector, Machine, SVM, methods, kmer
786 days ago
ReConPlot: an R package for the visualization and interpretation of genomic rearrangements
ReConPlot (REarrangement and COpy Number PLOT), an R package that provides functionalities for the joint visualization of SCNAs and SVs across one or multiple chromosomes. ReConPlot is based on the popular ggplot2 package, thus allowing customization of plots and the generation of publication-qua...Tags: ReConPlot, R, package, visualization, interpretation, genomic, rearrangements
136 days ago