Results for "Packages"
Bio-Scripts
Conda command to install checkV
...dated specs: - checkv The following packages will be downloaded: pa...Total: 25.9 MB The following NEW packages will be INSTALLED: biopy...orge/noarch::zipp-0.6.0-py_0 The following packages will be UPDATED: libgcc-...649 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...\t blastDB, If not installed sucessfully, delete the folder and re-run it" fi echo -e "\nAll Done\n" echo -e "\nInstall R package install.packages('Ckmeans.1d.dp') \n" /;...1174 days ago
- ...4308_1 openssl 1.1.1i-h7f98852_0 --> 1.1.1j-h7f98852_0 Proceed ([y]/n)? y Downloading and Extracting Packages sibelia-3.0.7 | 24.8...
1161 days ago
Install assembly-stat using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda assembly-stats Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1067 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda ragout Collecting package metadata (current_repodata.json): done Solving environment:...
1067 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda spades Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1067 days ago
- .... Done The following additional packages will be installed: autocon...nded scour zlib1g-dev Suggested packages: autoconf-archive gnu-stan...r1.2-rsvg-2.0 The following NEW packages will be installed: autocon...Extracting templates from packages: 100% Selecting previously u...
1067 days ago
Install trimmomatic using Conda !
...=> WARNING: A newer version of conda exists. pkgs/main::certifi-2021.5.30-py37h06a4308_0 Proceed ([y]/n)? y Downloading and Extracting Packages certifi-2021.5.30 | 139 K...1067 days ago
Install grabseqs using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1067 days ago
- ...a3/envs/ added / updated specs: - megahit The following packages will be downloaded: pa...Total: 2.9 MB The following NEW packages will be INSTALLED: megah...
1059 days ago
