BBTools for bioinformatician !
...----------------------------------------------------------------getreads.shIf you only know the number(s) of the fasta/fastq record(s) in a file (records start at 0) then you can use...2287 days ago
Basic command-line to run BLAST
...is something many of you have probably seen in one form or another – it’s pretty ubiquitous. It’s just a text file, containing records; each record starts with a li...2260 days ago
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splitbam: splits a BAM by chromosomes
...iles if no sam record was found for a chromosome. A pair of 'mock' SAM-Records can also be added to those em...g no read mapped -m | --mock : if option '-e', add a mock pair of sam records to the empty bam -p (output...2639 days ago
Awesome perl frameworks, libraries and software - PART 2
...rt-comments - Perl programming module for easier debugging chetanganatra/Excel-2-Elasticsearch - Small and quick Perl script to inject records from MS Excel (.xlsx as well...2510 days ago
Awesome perl frameworks, libraries and software - PART 3
...in to the application layer including Hadoop, Big Data, NoSQL and Web Scale technologies, APIs etc. benbernard/RecordStream - commandline tools for slicing and dicing JSON records. iberianpig/xSwipe - Mu...2510 days ago
GenBank release 257.0 is now available!
...ase has 25.10 trillion bases and 3.69 billion records. Learn more: https://ncb...ase has 25.10 trillion bases and 3.69 billion records. The current release has:...ase pairs of sequence data 2,631,493,489 WGS records containing 22,294,446,104,543...272 days ago
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Memories Can Be Passed Down Through DNA
...A sequences (and therefore the same genetic instruction sets), yet maintain different terminal phenotypes. This nongenetic cellular memory, which records developmental and environment...3664 days ago
Retrieve NCBI GenBank records with a range of accession numbers
...returnType => undef, maxRecords => undef, format =>...\$param{returnType}, 'm|max_records=i' => \$param{maxRecords},...3; if ( defined( $param{maxRecords} ) ) { if ( $count >...( defined( $param{maxRecords} ) && ( $param{maxRecords} ==...2932 days ago
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Tags: Tbl2asn, program, creation, sequence, records, submission, GenBank
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GenBank release 257.0 is now available!
GenBank release 257.0 is now available! This release has 25.10 trillion bases and 3.69 billion records. Learn more: https://ncbiinsights.ncbi.nlm.nih.gov/2023/08/21/genbank-release-257/ GenBank release 257.0 (8/15/2023) is now available on the NCBI FTP site. This release has 25.10...Tags: GenBank, Release, Dataset, Records, Sequences
272 days ago
Comment on "Coronavirus Resources !"
Raw and assembled sequences related to the COVID-19 outbreak, including outbreak isolates and records relating to coronavirus biology. Includes extensive sampling information. https://www.covid19dataportal.org/sequences?db=embl1440 days ago
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