Results for "Regular%20Expressions"
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a great biological programmer or bioinformatician inv...3950 days ago
Basic command-line to run BLAST
The goal of this tutorial is to run you through a demonstration of the command line, which you may not have seen or used much before. All of the commands below can co...2244 days ago
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Bookmarks
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3950 days ago
International Conference on Bioinformatics Models, Methods and Algorithms
The purpose of the International Conference on Bioinformatics Models, Methods and Algorithms is to bring together researchers and practitioners interested in the application o...3500 days ago
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Files
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and user fr...3953 days ago
Pages
Awesome perl frameworks, libraries and software - PART 2
licheng/gccfilter - gccfilter is a perl filter to colorize and simplify (or expand) gcc diagnostic messages. gccfilter is particularly aimed at g++ (i.e. dealinging wit...2494 days ago
Awesome perl frameworks, libraries and software - PART 3
fujiwara/perl-queue-q4pg-lite - simple message queue using PostgreSQL. formbuilder/formbuilder - Perl CGI::FormBuilder module for generating, validating, and proc...2494 days ago
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Top-level pages
Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list Bioinformatics courses offered around the world. Reasons for constructing this page are: To show the extent of gro...3943 days ago
- Linux Commands Cheat Sheet File System ls — list items in current directory ls -l — list items in current dir...
2874 days ago
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Wire posts
News
- A team from Cold Spring Harbor Laboratory has released an algorithm, called Scalpel, for finding insertions and deletions in next generation sequencing data sets. Scalpel, whi...
3546 days ago
India and Germany to begin joint research in the area of 'Bioinformatics in Health Research'
To facilitate bilateral cooperation in biotechnology between the scientific communities of India and Germany, the Department of Biotechnology (DBT) will soon begin collaborati...2300 days ago
Opportunity posts
Senior Bioinformatics Programmer and SRF at BIOTECH PARK Lucknow
BIOTECH PARK Advt. No. 3 (8)/BP/13 A walk-in-interview will be held in the Biotech Park Office at Sector G, Jankipuram, Kursi Road, Lucknow (U.P.) August 27, 2013 at 11....3908 days ago
"Advances in Molecular Dynamics of Biomolecules" December 3-4, 2013 @ JNU
The extensive growth of computational power and resources over the last two decades has led to a remarkable progress in the large scale simulations at the molecular level. Mol...3877 days ago
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Bio-Scripts
Read lines from input file – print lines that match a regular expression
#!/usr/bin/perl use strict; use warnings; my $line; #read the line-by-line for each line ask if it matches the regex print it if it matches while($line = ){...2917 days ago
Parse a genbank file using regular expressions
#! /usr/local/bin/perl -w $genbank = "genbank_file.txt"; open (GENBANK, $genbank) || die "cannot open $gb_report for reading: $!"; # Flag for multiline translation; 1...2917 days ago
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Comments
Comment on "Regular Expression Cheat Sheet"
You can also use this regular expression tutorial @ http://sunsite.ualberta.ca/Documentation/Misc/perl-5.6.1/pod/perlretut.html3949 days ago
