Results for "Separated"
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List of In-silico Binding Site Prediction Tools
...ntify binding sites suitable for the docking of a drug-like ligand and we have so created a database called sc-PDB. The sc-PDB database provides separated MOL2 files for the ligand, it...3756 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...algorithm output is a call table -- a comma-separated file with one line for each b...variants and nucleotide changes; whitespace- separated format, VCF, pileup, HGVS Ou...der line (starting with "#") followed by tab-separated annotations”; VCF...2921 days ago
Perl Special Vars Quick Reference
...coding ${^ENCODING} The object reference to the Encode object, used to convert the source code to Unicode. ${^OPEN} Internal use: \0 separated Input / Output layer informat...2656 days ago
Awesome perl frameworks, libraries and software - PART 1
...sp;- Roles in Perl. Nothing else. njlg/perl-rethinkdb - A Pure Perl RethinkDB Driver naoya/perl-Text-LTSV - Text::LTSV - Labeled Tab Separated Value manipulator memcached/...2501 days ago
- ...data table can resides in a text file. The cells inside the table are separated by blank characters. Here is...table) CSV File The sample data can also be in comma separated values (CSV) format. Eac...
2501 days ago
- ...directory for temporary files [default: <output_dir>/tmp] -k <int,int,...> comma-separated list of k-mer sizes (must be...
2363 days ago
PerlOneLiner for Bioinformatician
...# Compress/expand all blank lines into N consecutive onesperl -00 -pe '$_.="\n"x4' # Fold a file so that every set of 10 lines becomes one tab-separated lineperl -lpe '$\ = $. % 10 ?...2314 days ago
LINKS scaffolder bloomfilter setting !
...MPET reads in their original outward orientation <- -> must be separated by ":" >template_name...o re-scaffold on. default -d 4000, optional) Multiple distances are separated by comma. eg. -d 500,1000,200...2163 days ago
Understanding BLASTn output format 6 !
...quence lengthsseqid Subject Seq-idsallseqid All subject Seq-id(s), separated by a ';'sgi Subject GIs...centage of positive-scoring matchesframes Query and subject frames separated by a '/'qframe Query frame...2150 days ago
- ...ted twice, but interrupted by "GG". Compound perfect SSR: This type of SSR contains two or more repeat motifs lying adjacent to each other, separated by no or very few intervening...
435 days ago
