Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for DNA and RNA sequencing. Each consumable flow cell can now generate 10–20 Gb of DNA sequence data. Ultra-long read leng...2319 days ago
BBTools for bioinformatician !
BBMap.sh Mapping Nanopore reads BBMap.sh has a length cap of 6kbp. Reads longer than...--------- Generate saturation curves to assess sequencing depth Code: $ b...n before". In this mode, once the line hits zero, sequencing...2269 days ago
Popular bioinformatics educational resources !
Followings are the list of popular bioinformatics educationa...University of Helsinki and Helsinki University of Technology, Finland. Ornl.gov/sci/techr...blogspot.com Blog focusing on bioinformatics, biotechnology, pharma regulatory affairs, I...2191 days ago
Thank You Email After Bioinformatics Interview !
A good interview thank you email or note should contain three essential pieces: a) Sho...llent match for my skills and interests.The lab loaded with new updated technology and international experts,&nb...1850 days ago
10 NGS services companies around the globe !
...as well as pharmaceutical, biotechnology, agrigenomics, commercial mol...company provides DNA and RNA sequencing and bioservices solutions to...Inc. provides next generation sequencing services such as whole genome...ationally. 7. Genotypic Technology Pvt. Ltd. (India) Genotypic...1258 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling evaluation for improved consensus accuracy (Arang...assemblies in conjunction with k-mer count information from raw, short-read sequencing...990 days ago
Protocol for De novo Genome Assembly using Illumina Reads
In this protocol, we address and describe the de novo assembly method for small to m...p into millions of tiny parts and read on a sequencing computer in a genome sequencing experiment. Depending on the...file format since this is what the Illumina sequencing...1203 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener J, Ferns B, Goulder P, Nastouli E...btv120. Epub 2015 Feb 28. Adapter sequences: Optimal enzymes for amplifying sequencing...1046 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. • &nb...ash;234, DSRC Compressor of sequencing reads. • Rog...space-saving solution for raw sequencing data, Bioinformatics,&nb...M Experimental compressor of sequencing reads. • Gra...862 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3JldKoA0zw This two minute video will change your mind on reproducible research 2. Parallel sequencing lives, or what makes large sequencing...540 days ago