Comment on "Installing Porechop on Ubuntu !"
...pter sets10,000 / 10,000 (100.0%) Best read Best start read end Set %ID %ID SQK-NSK007 96.6 81.8 Rapid 66.1 0.0 SQK-MAP006 80.0 82.6 SQK-MAP006 Short 76.9 76.0 PCR adapters 1 82.6...2109 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...nment. [false] -C --comment Append FASTQ comment to SAM output. [false] -o --output [STR] Output file (SAM format). [stdout] -h --help Print this short usage. -H --HELP Print a deta...2126 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...pped 254 bubbles and trimmed 20 tips[M::main] ===> Step 4.3: cutting short overlaps (3 rounds in total)...-arcs[M::asg_arc_del_asymm] removed 1392 asymmetric arcs[M::asg_arc_del_short] removed 4908 short overlaps[...2284 days ago
Comment on "Worldwide funding agencies to fund your bioinformatics research !!"
...p;Arturo Falaschi ICGEB Fellowship Programmes for PhD, PostDoc and Short term courses The Arturo Falaschi ICGEB Fellowships programme offers long and short-term fellowships for scientis...2739 days ago
Comment on "Worldwide funding agencies to fund your bioinformatics research !!"
...play a crucial role in the future field of science and technology through the close collaboration of industry-academia-government by facilitating short-term visits of competent Asia...2781 days ago
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Comment on "Tools to detect synteny blocks regions among multiple genomes"
A Fugu–Human Genome Synteny Viewer: web software for graphical display and annotation reports of synteny between Fugu genomic sequence and human genes http://nar.oxfordjournals.org/content/32/8/2618.short3199 days ago
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Comment on "Commercial and public next-gen-seq (NGS) software"
...x.phpSHRiMP: http://compbio.cs.toronto.edu/shrimp/SHORE (1001genomes.org): http://1001genomes.org/downloads/shore.htmlCloudBurst (Highly Sensitive Short Read Mapping with MapReduce):...3625 days ago
Comment on "List of popular bioinformatics software/tools"
TopHat http://tophat.cbcb.umd.edu/manual.shtml is a program that aligns RNA-Seq reads to a genome in order to identify exon-exon splice junctions. It is built on the ultrafast short read mapping program Bowtie.3652 days ago