1981 days ago
ARCS: scaffolding genome drafts with linked reads
ARCS requires two input files: Draft assembly fasta file Interleaved linked reads file (Barcode sequence expected in the BX tag of the read header or in the form "@readname_barcode" ; Run Long Ranger basic on raw chromium reads to produce this interleaved file)1980 days ago
Biotite: A general framework for computational biology
...ectively, database downloads files from the other databases such as RCSB PDB, and application provides interface for external software. The Biotite ...1979 days ago
Genome Annotation using MAKER tutorial !
MAKER is a great tool for annotating a reference genome using empirical and ab initiogene predictions. GMOD, the umbrella organization that includes MAKER...1977 days ago
Versatile genome assembly evaluation with QUAST-LG
QUAST-LG is an extension of QUAST intended for evaluating large-scale genome assemblies (up to mammalian-size). QUAST-LG is included in the QUAST p...1975 days ago
GenoViz: Visualization software for genomics
GenoViz provides software applications and re-usable components for data visualization and data sharing in genomics. Our flagship product is Integrated Genome Browser (IGB).For...1964 days ago
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
...s in clinical research and diagnostics. EXCAVATOR is freely available at http://sourceforge.net/projects/excavatortool/.EXCAVATOR is a novel software package for the detection of...1962 days ago
1955 days ago
molinspiration: broad range of cheminformatics software tools supporting molecule manipulation
Molinspiration offers broad range of cheminformatics software tools supporting molecule manipulation and processing, including SMILES and SDfile conversion, normalization of...1946 days ago
Osprey: Network Visualization System
Osprey is a software platform for the visualization of complex biological interaction networks....by the TyersLab and is a part of the BioGRID family of software. It utilizes both MySQL&...1946 days ago