Results for "Steps"
Bookmarks
...rganisms acquire and process transcriptomic high-throughput sequencing data without having to learn extensive bioinformatics skills. It covers all steps from tissue collection, sampl...2606 days ago
Metagenomics assembly workshop !!
Welcome to the one-day metagenomics assembly workshop. This tutorial will guide you through the typical steps of metagenome assembly and binning. The Tutorial Data Set Fa...2590 days ago
Perlbrew: admin-free perl installation management tool.
...https://install.perlbrew.pl | bash # FreeBSD \fetch -o- https://install.perlbrew.pl | sh If you prefer to install with cpan, there are two steps: sudo cpan App::perlbrew pe...2505 days ago
ONT assembly and Illumina polishing pipeline
This pipeline performs the following steps: Assembly of nanopore reads using Canu. Polish canu con...a paired-end Illumina dataset onto the contigs obtained in the previous steps using BWA mem. Per...2371 days ago
RITA: Rapid identification of high-confidence taxonomic assignments for metagenomic data
...ement, which constitute the highest-confidence set. Sequences not classified in this manner are subjected to a series of downstream classification steps. This work has been accepted...2367 days ago
fragScaff: Genome Assembly with Contiguity Preserving Transposition
...roviding midrange contiguity to support robust, accurate chromosome-scale de novo genome assemblies without the need for laborious in vivo cloning steps. Further information about f...2199 days ago
LSC :a long read error correction tool
Getting Started These simple steps will help you integrate LSC into your transcriptomics analysis pipeline. Read the LSC_requirements for running LSC. Download an...2119 days ago
- GRSR is a Tool for Deriving Genome Rearrangement Scenarios for Multiple Uni-chromosomal Genomes. This tool will do the following steps: Step 1. Run mugsy to get multiple sequence...
2062 days ago
- ...ng-read (PacBio) genome assembly. It demonstrates how to use long PacBio sequencing reads to assemble a bacterial genome, and includes additional steps for circularising, trimming,...
2056 days ago
AMStat: display statistics of large sequence files from next generation sequencing projects
...roblems, such as remaining linker and adaptor sequences, causing poor mapping. Apart from this SAMStat can be used to verify individual processing steps in large analysis pipelines.2020 days ago
