Five key traits to seek out in potential bioinformatics candidates !!!
...informatics can discover biological patterns and stories in genomic and proteomics data. They can develop the pipeline needed to properly collect, store and analyse it. Once your...3189 days ago
How to install Perl modules on Mac OS X in easy steps !!
...install discs, or available as a huge but free download from the Apple Developer Connection [free registration required] or the Mac App Store. I thought I had them, but ap...2753 days ago
3902 days ago
Public Databases for Bioinformatics !
...fault home directory full backups nightly nfs mount to dhara should store code, papers, and other highly processed data here /mnt/data/ globally accessible data should store common data here e.g. genome...1138 days ago
3919 days ago
Bio++ : C Language libraries for your biological need
...rom CSV files, probability distributions.etc. Utils Files: working on file paths, getting file extensions and names, testing existence, open and store in string arrays, etc.Text: c...3946 days ago
A guide for complete R beginners :- Installing R packages
...server should you use to download the package. Installing packages without root access First, you need to designate a directory where you will store the downloaded packages. On m...3356 days ago
3946 days ago
Next generation sequencing in R or bioconductor environment
...klayer, GenomicFeatures and BSgenome. Compared to the IRanges container, the GRanges/GRangesList classes are more flexible and extensible to store additional information about...3623 days ago
3888 days ago
SCFBio have developed Sanjeevini
...on for drug design called Sanjeevini (https://play.google.com/store/apps/details?id=com.sanjeevin.... It is available free of charge. You can download it using Google play store. Just search for "Sanjee...2360 days ago
Big genomic data on Google Cloud Platform
...genomics community to define a standard API for working with big genomic data sets in the cloud. Building on Google Cloud Platform, we show how to store, process, explore and share g...3487 days ago
Download the genome from NCBI using bash script/command
..." filename="${filename%.*}" # Create a directory with appending G mkdir "G$filename" cd "G$filename" # take action on each file. $f store current file name wget --i...2531 days ago
Download the gff files from NCBI using bash script/command
...filename="${filename%.*}" # Create a directory with appending G mkdir "GFF$filename" cd "GFF$filename" # take action on each file. $f store current file name head -n...2522 days ago
Tags: Bioinformatics, Computational Biology, Big data, Analysis, Share, Run, Compute, Free, Arvados, Organise, Store
3513 days ago
Comment on "Sibelia: A comparative genomics tool"
...the total size of all input genomes. You can also use switch -r or --inram that will force "Sibelia" to not create any temporary files and store all it's data in RAM. Out...1284 days ago
Comment on "REAPR: a universal tool for genome assembly evaluation"
...alt mapping, and the perfect mapping to run the reapr pipeline. Run reapr pipeline to get help on how to run, and then run the pipeline. Store the results in reapr_<...1336 days ago