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3916 days ago
Five unique traits of effective computational biologist
...roduce working code. There are some technically skilled biological p...l programmer. 1. Learn and get updated Some of the bad biological...t a year before because it looked interesting; and the great biologi...aph (which they generally produce after one year of work) biological...3949 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...module is missing. Can't locate XML/parser.pm in @INC (@INC c...ver is not connected to the Internet. Download Perl module: G...perl -MCPAN -e shellCan't locate CPAN.pm in @INC (@INC contain...bsp; : perl-Test-Harness &n...3949 days ago
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Regular Expression Cheat Sheet
...find any good and user friendly regular expression cheat sheet, hence write our own cheat sheet. The...sions, including symbols, ranges, grouping, assertions and some sample patterns to get you started.3952 days ago
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Bio++ : C Language libraries for your biological need
...nguage. As Dennis Ritchie writes in his paper, "The Developme...ntly, it supports object-oriented programming in a familiar se...or formats like SVG, Fig or LaTeX-PGF.So get relax and solve t...on-homogeneous model is supported!Mixed models (beta). Molecu...3947 days ago
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Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...nization and evolution of biological systems using computational biology and bioinformatics techniques. We seek to accuratel...ict links, such as specific molecular interactions, in eukaryotic cell s...ns to cause disease. This work is supported through the development of o...3947 days ago
3918 days ago
Bioinformatician become producer/director !!!
...movies, names will be like this.... BLAST : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine...Bioinformatician No.1 Mera Naam Tool Developer Hum Apke Genome Mein Rehte Hein Do Sequence Baara...3918 days ago
Perl Poem: Parse it in both Perl and English!
..., Sharon Hopkins. She has written quite a few Perl poems, as w...on Perl poetry that she presented at the Usenix Winter 1992 Te...#!/usr/bin/perl APPEAL: listen (please, please); open your...hidden), open (locks, doors), tell secrets;do not, I-beg-you,...3918 days ago
Personalised Medicine - Animation
Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.3903 days ago
Influenza animation - flu virus mechanism
...nism of an influenza virus and how Crucell's antibodies target the HA1 proteins on the virus and prevent f...gn: Javier Barrero, Logical Disorder Production Company: David Hager, All Terrain Media3852 days ago
Install BLAST in Ubuntu/Linux and Window !
...ncbi.nlm.nih.gov/blast/executables/blast+/2.7.1/ncbi-blast-2.7.1+-win64.exe with your web browser. #If that FTP links does not work, try HTTP instead http://ftp.ncbi.nlm.nih.gov...1146 days ago
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Which of the following programming language is best for a bioinformatics beginner?
...o assembly, map reads, align reads, and expression analysis. Recommendations welcomed. Which languages would you recommend to a student wishing to enter the world of bioinformatics?3530 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3525 days ago
Interview with a bioinformatician series ...
The aim of this series to interviews some notable bioinformaticians to get their views on various aspects of bioinformatics research. Hopefully these answers will prove useful to o...3416 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...ty of Gene Engineering and Biotechnology Institute at TUBITAK MAM Research Cente...h a Bioinformatician” interview series ... What pus...prokaryotic two-component systems. In this project, I will be...r effective methods to eliminate the manipulated data and reac...2361 days ago
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Tags: Bioinformatics, Analysis, NGS, Repeats, TE, RepeatModeler, RECON, de-novo, family, Genome
2816 days ago
The Extensive de novo TE Annotator (EDTA)
The EDTA package was designed to filter out false discoveries in raw TE candidates and generate a high-quality non-redundant TE library for whole-genome TE annotations. Selection of initial search programs were based on benckmarkings on the annotation performance using a manually curated TE libra...Tags: Extensive, de novo, TE, Annotator, EDTA
1731 days ago
Comment on "Basic command-line to run BLAST"
Understanding the parameters https://www.arabidopsis.org/Blast/BLASToptions.jsp397 days ago
Comment on "Benchmarking Perl Module !"
...olves measuring the performance of the module in terms of its execution time and...g the following command: cpan Benchmark Write benchmark code: Write a simpl...ese function takes two arguments: the number of iterations to run and a reference...414 days ago