Bash commandline to install Anaconda !
...andoc-2.2.3.2-0 ... installing: readline-7.0-h7b6447c_5 ... installing: tk-8.6.8-hbc83047_0 ... install...1dba3_0 ... installing: multipledispatch-0.6.0-py37_0 ... installing: nltk-3.4-py37_1 ... installing: o...1566 days ago
Bash command to install Miniconda !
...=py37_0 - six==1.12.0=py37_0 - sqlite==3.30.0=h7b6447c_0 - tk==8.6.8=hbc83047_0 - tqdm...7_0 sqlite pkgs/main/linux-64::sqlite-3.30.0-h7b6447c_0 tk pkgs/main/lin...1566 days ago
Bash command to install bwa, samtools, picard !
...tion: done Executing transaction: done (my_GATK) [wsu29@bladeamd-2 tmp]$ cond...ata/sata_data/workshop/wsu29/anaconda3/envs/my_GATK added / updated specs:...tion: done Executing transaction: done (my_GATK) [wsu29@bladeamd-2 tmp]$ cond...1566 days ago
Bash command to install GATK, Bedtools and SnpEff !
(my_GATK) [wsu29@bladeamd-2 tmp]$ conda install gatk Collecting package metadata...py38_0 156 KB gatk-3.8 |...ertifi-2019.11.28-py38_0 gatk bioconda/noarch...################## | 100% gatk-3.8 | 8 KB |...1566 days ago
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Install python-numpy python-scipy python-matplotlib on Ubuntu !
...on-pil python-subprocess32 python-tk python-tz tk8.6-blt2.5 ttf-bitstream-ve...l-dbg python-scipy-doc tix python-tk-dbg The following NEW packag...ing previously unselected package tk8.6-blt2.5. (Reading database...viously unselected package python-tk. Preparing to unpack .../16-...1552 days ago
Commands to install conda in Ubuntu !
...andoc-2.2.3.2-0 ... installing: readline-7.0-h7b6447c_5 ... installing: tk-8.6.8-hbc83047_0 ... install...1dba3_0 ... installing: multipledispatch-0.6.0-py37_0 ... installing: nltk-3.4-py37_1 ... installing: o...1522 days ago
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