Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
IEEE Transactions on Knowledge and Data Engineering accepts bioinformatics and algorithms manuscripts https://www.computer.org/csdl/journal/tk1264 days ago
Comment on "Sibelia: A comparative genomics tool"
...aph is generated for K = min(Kn, MinimumBlockSize) or for value of "--lastk" cmd parameter if it is set,...sed for the last stage. You can override this value by setting the "--lastk" parameter: --lastk <...1279 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
International Journal of Bioinformatics Research and Applications Indexed in Scopus (Elsevier) Academic OneFile (Gale) ACM Digital Library Current Awareness in Biological Sciences (Elsevier) Chemical Abstracts (CAS)1357 days ago
Comment on "Setting up autoConTAMPR !"
...tting up mafft (7.123-1) ...Setting up maq (0.7.1-5) ...Setting up muscle (1:3.8.31-1) ...Setting up perl-doc (5.18.2-2ubuntu1.7) ...Setting up perl-tk (1:804.031-1build1) ...Settin...1436 days ago
Comment on "Biological databases !"
all GATK bundle at ftp://ftp.broadinstitute.org/bundle/hg38/1532 days ago
Comment on "Biological databases !"
NCBI released a set of GATK-specific dbSNP VCF's, with the "chr" attached. Those can be accessed at ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606/VCF/GATK/.1537 days ago
Comment on "Virtual Bioinformatics Online Tutorial"
Bioinformatics online training resources Cancer Research UK Cambridge Bioinformatics core facility HarvardX Biomedical Data Science Open Online Training SIB...2314 days ago
Comment on "Software packages for next gen sequence analysis"
...p;filterKeyword=&filterJournals=PLoSONE&query=&ELocationId=&id=&resultView=list&sortValue=&unformattedQuery=*%3A*&sortKey=&filterSubjects=Sequenc...3236 days ago
Comment on "List of popular bioinformatics software/tools"
There are different ways to perform exome sequence analysis, but GATK have a good guide for 'Best Practice': http://www.broadinstitute.org/gatk/guide/best-practices3582 days ago
Comment on "Five unique traits of effective computational biologist"
...s. Genome Biology14:104 [link] Via A, De Las Rivas J, Attwood TK, Landsman D, Brazas MD, et al...land J,Moran F, Mulder N, Nyrönen T, Rother K, Schneider MV, Attwood TK. (2013) Best practicesin bioi...3823 days ago