Results for "U-Plot"
Blogs
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and try to make sense of it, biologically. But, most of the newbie b...3722 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biological phrases to specific genes that are either chosen by trained curators or generated automatically. GO is d...3724 days ago
- +4 more Blogs
Bookmarks
- This tutorial is intended to introduce users quickly to the basics of R, focusing on a few common tasks that biologists need to perform some basic analysis:...
3923 days ago
- R-chie allows you to make arc diagrams of RNA secondary structures, allowing for easy comparison and overlap of two structures, rank and display basepairs in colou...
2817 days ago
- +34 more Bookmarks
Pages
A guide for complete R beginners :- Getting data into R
For a beginner this can be is the hardest part, it is also the most important to get right. It is possible to create a vector by typing data directly into R using the...3372 days ago
Awesome perl frameworks, libraries and software - PART 3
fujiwara/perl-queue-q4pg-lite - simple message queue using PostgreSQL. formbuilder/formbuilder - Perl CGI::FormBuilder module for generating, validating, a...2509 days ago
Top-level pages
Bioinformatics Companies in India
Following are the list of top 30 bioinformatics companies in India. The companies name order does not follow any specific pattern. 1. Accelrys Software Solution Pvt Lt...3940 days ago
- 1.Xcode Life Sciences Pvt. Ltd.6B, Eldorado, 112, Nungambakkam High Road,Nungambakkam, Chennai 600034Tamil Nadu, India 2.Mapmygenome™Royal Demeure,HUD...
3934 days ago
- +6 more Top-level pages
Wire posts
News
- R 3.2.0 (codename “Full of Ingredients”) was released yesterday. You can get the latest binaries version from here. (or the .tar.gz sour...
3320 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017 ORLANDO, USA, Oct 17, 2017/ PRNewswire/ Strand NGS now supports large scale RNA- and small-...2401 days ago
Opportunity posts
- National Institute Of Cancer Prevention & Research - ICMR Research Assistant Bioinformatics recruitment in National Institute Of Cancer Prevention & Research...
2742 days ago
Bio-Scripts
Download genome using NCBI esearch command line !
#Download using command line "NC_005956.1" / "CP003784.1" esearch -db nucleotide -query "NC_005956.1" | efetch -format fasta > seq1.fa esearch -db nucleotide -quer...1116 days ago
- #!/usr/local/bin/perl -w # NOTE: YOU MUST CHANGE THE LINE ABOVE TO POINT TO # THE FULL PATH OF THE PERL EXECUTABLE ON YOUR SYSTEM. # System requirements: requires...
2708 days ago
- +20 more Bio-Scripts
Tags
Genome U-Plot: a whole genome visualization
Genome U-Plot for producing clear and intuitive graphs that allows researchers to generate novel insights and hypotheses by visualizing SVs such as deletions, amplifications, and chromoanagenesis events. The main features of the Genome U-Plot are its layered layout, its high spatial resolution an...Tags: Genome, U-Plot, whole, genome, visualization
2137 days ago
U-Plot: Genome U-Plot sample implementation
The Genome U-Plot is a JavaScript tool to visualize Chromosomal abnormalities in the Human Genome using a U-shape layout.Tags: U-Plot, Genome, U-Plot, implementation, visualize
1539 days ago
Comments
Comment on "Sibelia: A comparative genomics tool"
Basic usage =========== In this manual it is assumed that "Sibelia" is properly installed and the directory with "Sibelia.py" is in your "PATH" environment variable...1299 days ago
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
Using KAT again (You will need the modules: KAT/2.1.1 and gnuplot/4.6.5) – we can plot the kmer content of the assembly compared to the kmer conten...1352 days ago
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