Install SibeliaZ in your Linux cluster !
...nsaction: done (jitenv) jitendra@Bathymodiolus:~$ sibeliaz You must provide the input file name (jitenv) jitendra@Bathymodiolus:~$ sibeliaz -h Usage: [-k ] [-b ] [-m ] [-a ] [-t...1245 days ago
1228 days ago
Set up WGD environment using conda !
...born-0.11.1 six-1.15.0 sklearn-0.0 threadpoolctl-2.1.0 tornado-6.1 wgd-1.2 (wgd) ➜ wgd git:(master) wgd zsh: correct 'wgd' to 'gd' [nyae]? n Usage: wgd [OPTIONS] COMMAND [ARGS]...1216 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...Statistics::Distributions', 'Getopt::Long', 'Statistics::R', 'Math::Round', 'File::Find', 'Bio::DB::Taxonomy', 'Pod::Usage', ); my ($ins...1173 days ago
1171 days ago
Perl script to check modules installed !
...Statistics::Distributions', 'Getopt::Long', 'Statistics::R', 'Math::Round', 'File::Find', 'Bio::DB::Taxonomy', 'Pod::Usage', ); my ($ins...1168 days ago
1002 days ago
Tadpole is 250x faster than SPADes assembler !
...Please read bbmap/docs/guides/TadpoleGuide.txt for more information. Usage: Assembly: tadpole.sh in...ameters: -Xmx This will be passed to Java to set memory usage, overriding the program's aut...988 days ago
Perl script for Smith-Waterman Algorithm
# Smith-Waterman Algorithm # usage statement die "usage: $0 \n" unless @ARGV == 2; # get sequences from command line my ($seq1, $seq2) = @ARGV; # scoring scheme my $MATCH = 1;...963 days ago
962 days ago