Results for "Utilities"
Bookmarks
Java utilities for Next Generation Sequencing by Pierre Lindenbaum
Java utilities for Bioinformatics https://github.com/lindenb/jvarkit3520 days ago
Entrez Direct: E-utilities on the UNIX Command Line
...his can eliminate the need for writing custom software to answer ad hoc questions. Queries can move seamlessly between EDirect commands and UNIX utilities or scripts to perform actions...2755 days ago
- ...dex of built-in subroutines and methods. Perl 6 ProgramsA collection of documents describing how to run the Perl 6 executable program and other utilities, how to debug Perl 6 programs...
2649 days ago
- Collectively, the bedtools utilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks. The most widely-used tools enable genome arithmetic: th...
2627 days ago
Seal: SEquence ALignment evaluation suite
Seal is a comprehensive sequencing simulation and alignment tool evaluation suite. This software (implemented in Java) provides several utilities that can be used to evaluate alig...2314 days ago
Jvarkit : Java utilities for Bioinformatics
Collection of Java tool kits for bioinformatics works: Jvarkit : Java utilities for Bioinformatics2158 days ago
LSC: Improving PacBio Long Read Accuracy by Short Read Alignment
...cution proceeds in batches of long reads the size of which can be set by --long_read_batch_size N. Better compressed intermediate files. Added utilities folder. Added support for mu...2068 days ago
NextDenovo: string graph-based de novo assembler for TGS long reads
...odified version of minimap2 for adapting input and output and producing more sensitive and accurate dovetail overlaps, and some useful utilities (see here for more...1582 days ago
SeqFu: A Suite of Utilities for the Robust and Reproducible Manipulation of Sequence Files
...cOS. A compiled program delivering high performance analyses Supports FASTA/FASTQ files, also Gzip compressed A growing collection of handy utilities, also for quick inspection of...796 days ago
