Results for "Various bioinformatics software"
Blogs
Frequently used bioinformatics tools for viral genome analysis !
...Keane JA, Kellam P, Otto TD. Bioinformatics. 2015 Jul 15;31(14):2374-6. doi: 10.1093/bioinformatics/btv120. Epub 2015 Feb 28. Ad...z, A. & Grabowski, S. BMC Bioinformatics 14, 160 (2013). Kraken: Krak.... MUMmer: Versatile and open software for comparing large genomes. Kurtz,...1060 days ago
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter trimming (fastp) Removal of host reads (Kraken 2; optional) Variant calling Read alignment...890 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. &b...pression of FASTQ files, Bioinformatics, 2014; 30(15):2213&ndash...for raw sequencing data, Bioinformatics, 2018; 34(16):2748&ndash...ating k -mer statistics, Bioinformatics, 2017; 33(17):2759&ndash...876 days ago
List of comparative genomics resources !
...-- COefficient of COAncestry software Find information about the ancestr...ryotes made easy A web-based software/database system aimed at an i...arative Genomic Hybridization software Visualize and explore compar...atfish Breeder and Researcher Bioinformatics Entry Location Find in...690 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3JldKoA0zw This two minute video will change your mind on reproducible research 2. Parallel...554 days ago
Bioinformatics tools to explore SSRs in genomes !
...s. SciRoKo: SciRoKo is a software tool that can identify SSRs...etection of Duplication) is a software tool that can identify SSRs in DNA...transcriptomic sequences from various organisms. These are just a few examples of the many bioinformatics tools available for exp...438 days ago
Common methods to discover tandem repeats
Tandem repeats are DNA sequences that are re...Tandem Repeat Finder: Tandem Repeat Finder is a software tool that identifies tandem r...ition. RepeatMasker: RepeatMasker is another software tool that can identify tandem...436 days ago
Calculate the significance of the difference between two trends
To calculate the significance of the difference between two trends, you...ific details of each step will depend on the type of test you choose and the software you use to perform the analys...431 days ago
Bioinformatics Tools for Phylogeny !
Direct access to the individual tools available on this server. Multiple Alignment:Phylogeny:Tree viewers:Utilities: MUSCLE PhyML TreeDyn Gblocks T-C...194 days ago
- ...databases can be crucial for various bioinformatics analyses, especially i...des precompiled databases for various purposes, including classification,...qiime2.org/) is a widely used bioinformatics platform for microbiome analy...th your analysis pipeline and software tools. NCBI 16s RNA...
24 days ago
