Results for "analyzing"
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Comment on "Benchmarking Perl Module !"
...chmark program that exercises the functionality of the module, running the benchmark using the timethese function from the Benchmark module, and analyzing the results to compare the pe...431 days ago
Comment on "Tools for Differential expression analysis"
...ps. There are several tools available for performing differential expression analysis, including: DESeq2: This R package is widely used for analyzing RNA-Seq data. It uses a negat...436 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...s in Bioinformatics is a comprehensive source for protocols and reviews in the multidisciplinary field of bioinformatics, including the areas of analyzing expression patterns, pathway...1558 days ago
- ...rimming, Error Removing and Quality Control for fastq data. dupRadar dupRadar. An R package which provides functions for plotting and analyzing the duplication rates depende...
2153 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...squo;s the quick and dirty of what was done: 1 Run minimap: This uses a pre-built set of defaults (the ava-pb in the code below) for analyzing PacBio data. Minimap only acc...2183 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
Korean researchers have sequenced and have begun analyzing the genome of the Far Eastern Amur leopard, Panthera pardus orientalis, an endangered sub-species of leopard found in so...2749 days ago
Comment on "Does anyone have Nanopore latest updates?"
Sequencing ultra-long DNA molecules with the Oxford Nanopore MinION http://biorxiv.org/content/early/2015/05/20/019281.full-text.pdf+html Additional tools for analyzing Oxford Nanopore minION data by John Urban https://github.com/JohnUrban/poreminion3287 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
ANGUS is a site built around the 2010 course on Analyzing Next-Generation Sequencing Data. It contains a number of detailed tutorials on mapping, assembly, mRNAseq, ChIP-seq, and resequencing analysis. Enjoy! http://ged.msu.edu/angus/index.html3921 days ago
