Results for "big data"
Blogs
AWK is a standard tool on every POSIX-compliant UNIX sys...say you supply as an argument the # name of a this data file: # # Bob Jones 32 # J...report, or do something with the # aggregate of the data you've accumulated over the c...1851 days ago
Introduction to Bioinformatics
...n healthcare, biotech and pharmaceuitcal industry as well as basic research. The course covers many of the topics transformed by the emergence of big data and computational technologie...1811 days ago
- This is an extract of taxdump-readme.txt t..._id -- node id in GenBank taxonomy database parent tax_id -- parent node id in GenBank taxonomy database rank -- rank of th...e fields: division id -- taxonomy database division id division cd...
1563 days ago
New Machine Learning Packages in R
Machine Learning autokeras v1.0.1: Implements an interface to AutoKeras,...ling models and classifiers based on sparse matrix objects representing textual data. It includes implementations...1515 days ago
Useful links to therapy, disease, drug and drug-target network data:
Useful links to therapy, disease,...ource combining detailed drug data with comprehensive drug targe...Drug-Target Network: network data of 890 drugs and 394 target h...Thomson Investigational drugs database including information on...kr/~parkkw/Lnet/ TDR Targets Database: identification and rank...1449 days ago
Perl one-liner for beginners !
I often use the following arguments to perl: -e Makes the line of code be execut...txt > textwithoutuppercase.txt; Print only the second column of the data when using tabular as a separ...1396 days ago
10 NGS services companies around the globe !
The global NGS services market is expected to...s tools, pipelines and workflows, compute resources, data analysis reports, and case st...vides a variety of services such as oligo synthesis, database construction, genome rese...1274 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based ass...mation from raw, short-read sequencing data to genotype a wide spectrum o...scripts that can assess the quality of data and the preprocessing pipelin...and other low-complexity gene amplicon data; performs allele calling whil...1007 days ago
Protocol for De novo Genome Assembly using Illumina Reads
In this protocol, we address and describe the de novo as...lead to treatments for infectious diseases. Raw NGS dataReads can be saved as a Fasta...have and what the standard is like. If required, raw data cleanup/quality trimming. Cho...1219 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener...8-9 (2009). Trimmomatic: Trimmomatic: A flexible trimmer for Illumina Sequence Data. Bolger, A. M., Lohse, M. &am...1062 days ago
