Results for "binary files"
Blogs
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for DNA and R...oOKSoftware for nanopore data, quality and error profileshttps://documentation.tgac.ac....ding tool https://sourceforge.net/projects/phusion2/files/smis/ List of assemb...2335 days ago
BBTools for bioinformatician !
BBMap.sh Mapping Nanopore reads...if the reads are in separate files Code: $ reforma...de-interleave reads into two files like this: Code: $ reform...in a single pass to minimize filesystem I/O. Personally, I never...duplicate reads from multiple files simultaneously, if they are c...2285 days ago
Basic command-line to run BLAST
The goal of this tutorial is to run you throug...nly the first part of the human and cow protein files - there are 24 files total for human. The databas...ls Note that this makes a lot of extra files, with the same name as the da...2258 days ago
Installing Bandage on Ubunty !
The following instructions successfully buil...is not updated and the previous index files will be used. GPG error: http..._PUBKEY 6A030B21BA07F4FBW: Some index files failed to download. They have...5a:amd64.(Reading database ... 480949 files and directories currently ins...2203 days ago
Install ImageMagick from Unix Source
...checking for suffix of object files... ochecking whether we are us...in/ld option to reload object files... -rchecking for objdump......yeschecking for X11 configure files... checking for GOMP_parallel...c -m 644 ./www/api/MagickWand/files.html /usr/local/share/doc/Ima...2160 days ago
- Download this https://github.com/tri...checking for suffix of object files... o checking whether we are...config.status: executing depfiles commands make[1]: Entering d...nction ‘void JobControl::ClearFiles()’: ./analysis/RunButterfly....checking for suffix of object files... o checking whether we are...
2147 days ago
CANU genome assembly parameters !
Choose the appropriate parameters to run Canu and run it. The assembly will take abou...bsp;about parameter tweaking. The output directory contains will contain many files. The most interesting ones ar...1959 days ago
- AWK is a standard tool on every POSI..., particularly ones that read files line by line and split on del...is true # BEFORE any of the files are read. The END pattern is...ming the arguments # are files for it to process delete...you're processing lines from files or standard # input. # # W...
1850 days ago
- This is an extract of taxdump-readme.txt to be found at ftp://ftp.ncbi.nih.gov/p...s.dmp readme.txt The readme.txt file gives a brief description of *.dmp files. These files contain taxonomic informatio...
1562 days ago
Protocol for De novo Genome Assembly using Illumina Reads
In this protocol, we address and describe the de novo assembly method for small to me...ippets/view/42540/install-fastqc-using-conda Quality trimming/cleanup of read files.This function trims adapters,...1219 days ago
