Results for "blast"
News
NCBI team released a new version of IgBLAST with four new improvements. IgBLAST is a popular NCBI package for cl...-V_penalty to be consistent with other IgBLAST penalty options. ...VK and rat VH germline genes. IgBLAST 1.15.0 is available for ...1558 days ago
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
...recently added a separate rRNA/ITS databases section on the nucleotide BLAST page for these targeted seque...Fungi type and reference material You can also download these from the BLAST db FTP area. See the NC...1527 days ago
- BLAST team added a new feature (Max 3' match), shown in Figure 1, to Primer-BLAST that limits the length of 3'...have any questions or concerns, please contact blast-help@ncbi.nlm.nih.gov
1462 days ago
Blast on Docker, Google Cloud, Amazon Cloud
...a Docker version of NCBI BLAST+ that you can use locally or...loud where we have pre-loaded BLAST databases. We are happy...ddition, we now offer 23 different BLAST databases on each cloud platf...her tools in your pipelines. NCBI BLAST databases are pre-loaded now...1390 days ago
IgBLAST 1.17 is now available with improved identification of productive V gene sequences
A new release of IgBLAST (1.17), the popular package for classifyin...w field , “V frame shift”, to the IgBLAST output to indicate whether th...with internal frame shifts. See the new IgBLAST manual on the NCBI GitHu...1274 days ago
BLAST+ 2.11.0 release is now available on FTP site !
BLAST+ 2.11.0 release is now available from our...e usage reports to NCBI to help us improve BLAST. This information is limited to the name of the BLAST program, some basic database...ture allows threading by query batch in rpsblast/rpstblastn. Enabling this opt...1261 days ago
NCBI BLAST have added new columns to the Descriptions
NCBI BLAST have added new columns to the Descriptions Table for web BLAST output. The new columns are Scientific Name, Common Name...display Your preferences will be saved for your next visit to BLAST, and when you download your r...1245 days ago
NCBIBLAST+ 2.14.1 now available
#NCBIBLAST+ 2.14.1 now available with improved docume...es they made. They added the cleanup-blastdb-volumes.py script to remove unused BLAST database volumes. Read the do...ng data from the NCBI with the update_blastdb.pl script. And fixed...243 days ago
- ...o the new NCBI Datasets Genome record pages that describe assembled genomes and provide links to related NCBI tools such as Genome Data Viewer and BLAST. The NCBI Genome reco...
292 days ago
Cleaner BLAST Databases for More Accurate Results
Do you use BLAST to identify a sequence or the...misclassified sequences are in the BLAST databases and show up in your...lt nucleotide (nt) and protein (nr) BLAST databases. Foreign...ncbi.nlm.nih.gov/2024/04/22/cleaner-blast-databases-more-accurate-resul...6 days ago
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