Results for "blast"
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BLAST options, setting and defaults
BLAST stands for Basic Local Alignment Search Tool and was developed by Altschul et al. (1990) and significantly improved by Altschul et al. (1997). It is a very fast search algorithm that is used to separately search protein or DNA databases. BLAST is best used for sequence similarity ...Tags: blast, settings, default, alignments, options
1967 days ago
TwinBLAST: When Two Is Better than One
TwinBLAST is a web-based tool for viewing 2 BLAST reports simultaneouslyside-by-side. It uses ExtJS (www.sencha.com/products/extjs/) to provide 2independently scrollable panels. BioPerl (www.bioperl.org) is used to indexraw BLAST reports and Bio::Graphics is used to draw pictograms of the BLASThi...Tags: TwinBLAST, blast, perl, HGT, LGT
1696 days ago
- REST API The Representational State Transfer (REST) sample clients are provided for a number of programming languages. For details of how to use these clients, download the client and run the program without any arguments. Language Download Requirements ...
Tags: REST, API, blast
938 days ago
- Kablammo helps you create interactive visualizations of BLAST results from your web browser. Find your most interesting alignments, list detailed parameters for each, and export a publication-ready vector image, all without installing any software.
Tags: Visualise, blast, results
566 days ago
NCBIBLAST+ 2.14.1 now available
#NCBIBLAST+ 2.14.1 now available with improved documentation, faster and more reliable database downloads, and some bug fixes. Check out the changes they made. They added the cleanup-blastdb-volumes.py script to remove unused BLAST database volumes. Read the documentation h...Tags: NCBIBLAST, blast, NCBI, Homology, Search, Sequence, Update, Available
243 days ago
- Genome sequencing projects have enormous potential for benefiting human endeavors. However, just as acquiring a language's vocabulary does not enable one to speak it, databases that list the amino acid composition of proteins do not directly tell us much about these proteins' higher-level structu...
Tags: Protein, Motif, evolution, Blast, HMM, Dr. R.Sowdhamini, India
3879 days ago
