Results for "brain mapping"
Blogs
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on..., SyMAP (http://www.symapdb.org/) SyMAP (Synteny Mapping and Analysis Program) v4.0 is...itable image of syntenic relationships or physical mapping can be obtained. http://www.a...2611 days ago
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial...ion in next generation sequencing data (paired end mapping, split reads, and depth of co...or CNV discovery and genotyping from depth of read mapping.2011a,2011b AGEa tools that...2704 days ago
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Bookmarks
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop t...OI: 10.1093/bioinformatics/btr441 ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using Next Ge...3488 days ago
Latest paper on comparison of mapping tools
A. Hatem, D. Bozdag, A. E. Toland, U. V. Catalyurek "Benchmarking short sequence mapping tools" BMC Bioinformatics, 14...cs.oxfordjournals.org/content/28/24/3169 Some new Mapping tool links: GSNAP http://re...3898 days ago
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Files
Bioinformatics approach to Boar Taint
Meat products obtained from intact male pigs often produce offensive smell...ng SNPs haplotypes in close linkage disequilibrium with QTLs and fine mapping of QTLs through association mapping of genotyped SNPs. &nb...3790 days ago
- Randomness and Probability Randomness and probability are two differnet concepts: p...s the object to be measured by probability. For example, probability is a mapping from randomness to the real n...
1615 days ago
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Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allow....Ancestral states reconstructions: Marginal likelihood.(Weighted) substitution mapping.Sequences simulation under an...3949 days ago
Genome Assembly Tools and Software - PART2 !!
...RMAP 2.1 – Short-read MappingRMAP is aimed to map accu...ds or bisulfite-treated reads mapping. There is no limitaions on re...ontains programs that support mapping of reads to a reference genom...IMAGE 2.4.1 – Iterative Mapping and Assembly for Gap Eliminat...2687 days ago
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Top-level pages
- Genomics is the study of the genomes of org...e of organisms and fine-scale genetic mapping efforts. The field also inclu...shed techniques of sequencing, genome mapping, data storage, and bioinforma...at a meeting held in Maryland on the mapping of the human genome in 1986.T...
3943 days ago
Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list Bioinformatics courses off...gy, bioinformatics, and biometryhttp://www.cs.helsinki.fi/combi/ Human Genome Mapping Project Resource Centre ...3944 days ago
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Wire posts
News
- Fifteen scientists led by Dr Jong Bhak of Genome Research Foundation, South Korea, d...11182690 http://timesofindia.indiatimes.com/home/environment/flora-fauna/Gene-mapping-of-tiger-completed/articlesho...
3883 days ago
Biggest Human Brain Project (HBP) launched!!!
"In neuroscience, the project will use neuroinformatics and brain simulation to collect and integra...identify biological signatures of brain disease, allowing diagnosis a...computing, driven by the needs of brain simulation, will impact a vas...; (https://www.facebook.com/humanbrainpr...3863 days ago
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Opportunity posts
Ph.D. Fellowship (Computational Biology/Bioinformatics) : Cork, Ireland : Cork, Ireland
Ph.D. Fellowship (18,000 euro/pa, plus tuition fees at the EU students rate) is avai...some profiling data. Ribosome profiling (ribo-seq) is a technology that allows mapping positions of the ribosomes on...3917 days ago
Research Fellow @ Mendel laboratory
IRCCS Casa Sollievo della Sofferenza – Mendel laboratory is seeking one talented bio...eq and miRNA-Seq data. Main activities will be: (i) data analysis (short-reads mapping, variants call and annotation...3814 days ago
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ResearchLabs posts
Queensland Centre for Medical Genomics, Grimmond Lab
Queensland Centre for Medical Genomics Research Area: pancreatic cancer; ovarian cancer; prostate cancer; bowel cancer; brain cancer; endometrial cancer; breast cancer; personalised medicine; high-throughput genomics Link @ http://www.imb.uq.edu.au/sean-grimmond3949 days ago
- Melanie Bahlo is an applied statistician working in the areas of statist...tics and population genetics. Her main area of research is linkage mapping, in humans and mice. Research Area: Mapping loci in ENU mutants in mice i...
3949 days ago
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Video
- Air date: Wednesday, January 04, 2012, 3:00:00 PM Time...otstein and three colleagues proposed a method for mapping human genes that laid the gro...e Human Genome Project. The basic principle of the mapping scheme was to develop, by rec...
3874 days ago
Dr. Ken Buetow: IS & Personalized Medicine Lecture-Part 1
Full Lecture Abstract Creating an Evidence Engine to Support Personalized Medicine...iest studies developing and applying linkage disequilibrium methods as genetic mapping tools. The laboratory also d...3871 days ago
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Bio-Scripts
Create genome scaffolding with Perl
#!/usr/bin/perl use warnings; use strict; use English; use Pod::Usage; ## uses pod documentation in usage code use Getopt::Long qw(:config auto_version auto_he...2309 days ago
Mapping with BWA-mem or BWA-sampe in one go with python script !
BAM files and mapping BESST requires sorted and indexed BAM files as input. Any read aligner +...indexed BAM files with BWA-mem or BWA-sampe in one go. An example call for mapping with this script is python...2125 days ago
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Tags
Biggest Human Brain Project (HBP) launched!!!
"In neuroscience, the project will use neuroinformatics and brain simulation to collect and integrate experimental data, identifying and filling gaps in our knowledge, and prioritising future experiments. In medicine, the HBP will use medical informatics to identify biological signatures of br...Tags: Brain, Neuroscience, HBP, Human, neuroinformatics, simulation, modelling, medical informatics, neurorobotics, microchips, neuromorphic computing, neural network, neurogenetics, optogenetics, brain mapping, sequencing
3863 days ago
BrainSpan Atlas of the Developing Human Brain
The BrainSpan atlas- web source for revealing transcriptional mechanisms involved in human brain development. Article: http://www.nbcnews.com/science/science-news/maps-unborn-human-brains-point-medical-frontiers-n71336 Paper: http://www.nature.com/nature/journal/vaop/ncurrent/full/nature13185...Tags: neuroscience, brain, transcription, microarray, brain mapping
3683 days ago
