PGAP-X: Extension on pan-genome analysis pipeline
...riation from pan-genome sight. At the same time, analytical result data from many other programs, including genome alignment result and orthologs clusters, are also supported to be fur...2290 days ago
2178 days ago
Snakemake—a scalable bioinformatics workflow engine
Snakemake is a workflow engine that provides a readable Python-based workflow definition language and a powerful execution environment that scales from single-core workstations to compute clusters without modifying the workflow.2068 days ago
2053 days ago
Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads
...is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads using a spaced seed met...2021 days ago
Nextflow: Data-driven computational pipelines
...on scripting languages. Its fluent DSL simplifies the implementation and the deployment of complex parallel and reactive workflows on clouds and clusters. More at https://github...1532 days ago
sunbeam: A robust, extensible metagenomics pipeline
...nbsp;to manage dependencies, so it doesn't have pre-existing dependencies or admin privileges, and can be deployed on most Linux workstations and clusters. To read more, check out ...1413 days ago
1357 days ago
390 days ago
OrthoVenn3: an integrated platform for exploring and visualizing orthologous data across genomes
OrthoVenn3 is a powerful tool for comparative genomics analysis, used as a web server for full genome comparisons, annotation, and evolutionary analysis of orthologous clusters across multiple species. It has already been used by thousands of users from over 60 countries.365 days ago